Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05365 ATGGCAGGGTTAAATTTTGAAGCTGAATATGTTGACAGCTTTGATCTTCTGAAGGTTTTTGCAGCTGAAGGTGTTGAGTTCCTTTTATCTTCTGAAGGAAAGGTACCATTATCTGACTGCAATGGGAAAATTATCTGCCTATTTTTCTCTGCCAACTGGTGTAGGCCTTGCAGACTATTCATTCCTCATCTGGTTGATCTTTATGAAACACTGAGAAAGAGGGGGATAAATATAGAGATCATATTTATTTCCTTTGACCGTGACGAGGATGGATTTAAAGAACACATCAAGAGTATGCCGTGGTTAGCCGTCCCATTTGATGCAAATATGCATAGAAGACTGATTGATAGATATCGGGTTGATCGAATCCCTTCATTCATTCCATTTTGTTCTGATGCCTTAACTGTCGATGAAAACATGATTGAGTGGATTGAGGATTATGGTGCTGATGCATTTCCTTTCACAAGGAAGAGACGTGAGGAACTGAAAGCCATAGATAAAAGTAAACGCGAAGAAGTAAATATAGAAGAATTATTGACACATGAAGGGCGCAACTTTCTCATTTCTGGAGATGATAGAAAGGTGCTTGTATCCGAACTAGCCGGGAAAACGGTAGGCCTATTTTTCGGTGCATACTGGTCTCCTCCGTGTCGTGCCTTCACCGTTCAACTTGCAGATGTATACAACAATCTCAAGGATACAAAAGGACACTGCTTTGAGATTGTTTTAATTTCAACAGATAAGGATCTCCAAGAATTCAATGTCAACAGAACTAGCATGCCTTGGCTTGCTATCCCATATGAGGACAGAACAAGGCATGACTTGTGTAGAATCTTTGATGTAAAGAAAATTCCAGCTTTGGTTTTCATTGGTCCGGATGGCAAAGTCATTAGTTTGGATGGAAAATTTATGGTCTCCTCATACGGCGCAGAAGCTTTTCCATTTACAGAATCGAGGATTAGAGATTTAGAAGCGGCTCTGAGAAAGGAAGGAGATGCTTTGCCTCAACAGGTTGAGGATGTGAAGCATGAACATGTACTTAAATTGGATATGGCCAAAGCTTATGTATGTGATTCTTGTAAGAAACAAGGCAAGTTCTGGGCATTCTCTTGTGATGTCTGTGACTATGATCTTCATCCAAGTTGTCTAGAGAAGGTCAACAATGACCAAAGTTGGTAG 1179 0.4029 MAGLNFEAEYVDSFDLLKVFAAEGVEFLLSSEGKVPLSDCNGKIICLFFSANWCRPCRLFIPHLVDLYETLRKRGINIEIIFISFDRDEDGFKEHIKSMPWLAVPFDANMHRRLIDRYRVDRIPSFIPFCSDALTVDENMIEWIEDYGADAFPFTRKRREELKAIDKSKREEVNIEELLTHEGRNFLISGDDRKVLVSELAGKTVGLFFGAYWSPPCRAFTVQLADVYNNLKDTKGHCFEIVLISTDKDLQEFNVNRTSMPWLAIPYEDRTRHDLCRIFDVKKIPALVFIGPDGKVISLDGKFMVSSYGAEAFPFTESRIRDLEAALRKEGDALPQQVEDVKHEHVLKLDMAKAYVCDSCKKQGKFWAFSCDVCDYDLHPSCLEKVNNDQSW 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05365 392 Gene3D Glutaredoxin 20 158 - -
Trre5g05365 392 Pfam C1 domain 342 382 IPR004146 -
Trre5g05365 392 SUPERFAMILY Thioredoxin-like 189 297 IPR036249 -
Trre5g05365 392 ProSiteProfiles Thioredoxin domain profile. 16 149 IPR013766 -
Trre5g05365 392 PANTHER THIOREDOXIN 8 345 - -
Trre5g05365 392 SUPERFAMILY Cysteine-rich domain 334 383 IPR046349 -
Trre5g05365 392 ProSiteProfiles Thioredoxin domain profile. 151 325 IPR013766 -
Trre5g05365 392 CDD TryX_like_TryX_NRX 185 315 IPR045870 GO:0004791
Trre5g05365 392 Gene3D Glutaredoxin 178 317 - -
Trre5g05365 392 Pfam Thioredoxin-like 202 296 IPR012336 -
Trre5g05365 392 Pfam Thioredoxin-like 42 127 IPR012336 -
Trre5g05365 392 SUPERFAMILY Thioredoxin-like 32 132 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05365 Trre-Chr5 54406128 54408091 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05365 K17609 - gmx:100778160 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05365 5 54406128 54408091 Trre5g05365 5 54406128 54408091 ECH