Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05360 ATGGAGATCCGTGCCGATGCAGCTGCAGAAACTACTTCATTTTCTTCAAGTTTGATCGCGGCAGTGTCATATGGAATTGCTTCAATGGCAATGGTTTTTATCAATAAAGCTGTTCTTATGCAGTATGCACATTCAATGACTCTACTCACTTTGCAGCAACTTGTTACCACCTTGCTTATACACTTTGGTCGAAAAATGGGATACACAAGAGCGAGAGGAGTGGATATGGCAACGGCCAAGCAACTGTTTCCGGTATCATTTTTCTATAATGCCAATGTTGCATTTGCTTTGGCCAGTTTGAAAGGAGTGAATATCCCAATGTATATTGCAATAAAGAGGCTTACACCACTTGCGGTACTTATCGTTGGATCATTCTTGGGAAAGGGGAGACCTACAGTTCAGGTGACTCTCTCAGTGATATTGACTGCTGCTGGAGTTCTCATAGCGGCCCTTGGAGATTTTTCCTTTGACCTTTTTGGGTATAGCATGGCTTTCATTTCTGTTTTCTTCCAGACCATGTACCTTGTGCTGGTGGAAAAATCTGGTGCTGAGAATGGACTTTCATCAGTGGAAATCATGTTCTACAACAGTTTTTTATCTCTTCCATTTTTGATGTTTCTTATTATAGCCACAGGGGAATTCCCAGATTCTTTATCTGTATTATTTGCAAAGAGTTATTCTTTTTCATTTTTGGTGATCCTTATTCTTTCGTTGGTGATGGGTATTGTTCTCAACTACACCATGTTCTTGTGCACTATTGTTAATTCTGCTTTAACTACAACTATTGTGGGCGTTCTCAAAGGAGTTGGTTCCACGACCTTCGGTTTCTTCTTACTTGGCGGTGTTCAAGTCCATGCTTTGAATGTGACCGGCTTGGTCATCAATACAGCAGGTGGTGTGTGGTATTCATATGCTAAATATCAGCAGAAAAAAAGCAAGACAGTGAAGCTAGTTACAGATGTGGAGGCTCATCGTAAATAG 981 0.4088 MEIRADAAAETTSFSSSLIAAVSYGIASMAMVFINKAVLMQYAHSMTLLTLQQLVTTLLIHFGRKMGYTRARGVDMATAKQLFPVSFFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLIVGSFLGKGRPTVQVTLSVILTAAGVLIAALGDFSFDLFGYSMAFISVFFQTMYLVLVEKSGAENGLSSVEIMFYNSFLSLPFLMFLIIATGEFPDSLSVLFAKSYSFSFLVILILSLVMGIVLNYTMFLCTIVNSALTTTIVGVLKGVGSTTFGFFLLGGVQVHALNVTGLVINTAGGVWYSYAKYQQKKSKTVKLVTDVEAHRK 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05360 326 PANTHER SOLUTE CARRIER FAMILY 35 18 310 - -
Trre5g05360 326 Pfam Triose-phosphate Transporter family 27 303 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05360 Trre-Chr5 54369792 54372746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05360 4 325 Lipid Metabolism Gene Families AT5G19980 25.588 5.91e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05360 K15281 - gmx:100777622 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05360 5 54369792 54372746 Trre5g05360 5 54369792 54372746 ECH