Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05356 ATGGAGTCTTCAGCTTCCGACTACGACGTCATTATCATCGGCGCCGGAGTCATGGGCAGTTCAACCGCATATCAAGCATCCAAAAGAGGCCTCAAAACCCTTTTGCTTGAACAGTTCGACTTCCTCCATCACCGTGGCTCCTCTCACGGCGAATCCCGCAACATCCGTGCCGCTTACCCGCAACACTATTACACCTCTTTAGTCATCAAATCCTACCAACTCTGGGAACAAGCCCAAACCCAAGCGGGCTTCAACGTCTATTACAAAGCCCATCACCTTGATATGGGCCCATCAAACGATCCCACCATTCTTTCCACCGTCGAAAACTTCCGCGAGAATAACCTCCCCTATCAAATCCTCCACCGTGAACAAGTCGCCGAGAAATTCTCCGGCCGGGTCGATATCCCAGACGACTGGGTTGGTCTGTCGACAGAGTACGGCGGAATAATCAAAGCCACAAAAGCTGTTACCATGTTTCAGACACTGGCTCGCAACCATGGTGCAGTGTTAAAGGATAATGTCGAAGTAACAGATATAAAAAACGACGGTGGCGGCGTTGTCGTTTCAACCTCGAACGGTGAAAATTTTCGCGGTAAAAAATGTGTGGTTACAGTGGGAGCATGGGTGAACAAATTAGTGAAGAAGATTAGTGGGATTGAACTTCCGATTCAACCATTGGAAACTCTTCTTTGCTACTGGAGAATAAAAGAAGGACATGAAGGTAAATTCACAATTAGCGGCGATTTTCCGACGTTTTGTAGCTTTGGTAAGGTTTTAATATATGGATCACCAAGTTTGGAGTTTCCGGGTTTGATTAAAGTTGCGGTTCACGACGGTAACCCGTGTGACCCGGATAAGAGACCTTGGGGGTCAGGTGTGATGATGAATGAGATGAAAGAGTGGATTGAAGGGAGATTTGGTGGTTTGGTTGATTCAAGTGAGCCTGTTGTGAAACTTTCTTGTATGTATTCTATGACTCCTGATGAGGATTTTGTTATTGATTTTTTGGGTGGTGAGTTTGGGGAAAAGGTTGTTTTGGGTGGCGGGTTTTCGGGTCATGGGTTTAAGATGGCTCCTGTTATTGGGAAGATATTGACTGAGCTTGTGGTGGATGGTGAAACAAATGAGGTTGATTTGAAACACTTTAGTATTGGAAGATTTAATAAGAACTCCAAGCATTAG 1182 0.456 MESSASDYDVIIIGAGVMGSSTAYQASKRGLKTLLLEQFDFLHHRGSSHGESRNIRAAYPQHYYTSLVIKSYQLWEQAQTQAGFNVYYKAHHLDMGPSNDPTILSTVENFRENNLPYQILHREQVAEKFSGRVDIPDDWVGLSTEYGGIIKATKAVTMFQTLARNHGAVLKDNVEVTDIKNDGGGVVVSTSNGENFRGKKCVVTVGAWVNKLVKKISGIELPIQPLETLLCYWRIKEGHEGKFTISGDFPTFCSFGKVLIYGSPSLEFPGLIKVAVHDGNPCDPDKRPWGSGVMMNEMKEWIEGRFGGLVDSSEPVVKLSCMYSMTPDEDFVIDFLGGEFGEKVVLGGGFSGHGFKMAPVIGKILTELVVDGETNEVDLKHFSIGRFNKNSKH 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05356 393 Gene3D - 91 325 - -
Trre5g05356 393 Gene3D - 8 375 IPR036188 -
Trre5g05356 393 PANTHER PEROXISOMAL SARCOSINE OXIDASE 6 392 IPR045170 GO:0016491|GO:0050660
Trre5g05356 393 SUPERFAMILY FAD-linked reductases, C-terminal domain 225 327 - -
Trre5g05356 393 Pfam FAD dependent oxidoreductase 9 368 IPR006076 GO:0016491
Trre5g05356 393 NCBIfam sarcosine oxidase, monomeric form 8 392 IPR006281 GO:0008115
Trre5g05356 393 SUPERFAMILY FAD/NAD(P)-binding domain 7 387 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05356 Trre-Chr5 54344363 54345544 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05356 K00306 - zju:107429922 572.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05356 5 54344363 54345544 Trre5g05356 5 54344363 54345544 ECH