Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05350 ATGGCTTACACCATTCCATCTTTTCGTCTCTTCAACCCTTCCGGTTCCAACTTCGCCTTCTCAACAACCAAGTTTACCGTCACTTTACACGCGGCTTCTTTCACGAACCGGGCGACTCGACTCACATCTAACTCAATGAGTCAACCCGCCGCCACCGATTCCAGCACTCTTTCGACACGTAATGACGCTCCGTCACCGTCAGAAAACGCCGATGTTGTGGTTCAGTACGTGGTGCTCCGGCGCGATCTGATTGATACTTGGCCATTAGGCAGTGTGGTTACTCAAGGTTGCCACGCTTCTGTTTCCGCCGTTTGGTCCAACAAAGACGATCCTATCACCATTGATTATTGCAGCCCCGATAAAATCGATTCTATGCACAAAGTTACACTAGAAGTGAAGGGAGAACCTCAGATCAAAAACTTGTCTGAGAAGCTAACATCTGGTGGGATCATTCACAAACTGTGGATTGAGCAACCTGAAAACATACCTACCTGCCTTGCCACAAAACCTTACCCTAAGTCAATTGTATCTTCGTATTTTAAGAAGTTGAAACTCTGCAAGTGA 564 0.4699 MAYTIPSFRLFNPSGSNFAFSTTKFTVTLHAASFTNRATRLTSNSMSQPAATDSSTLSTRNDAPSPSENADVVVQYVVLRRDLIDTWPLGSVVTQGCHASVSAVWSNKDDPITIDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLTSGGIIHKLWIEQPENIPTCLATKPYPKSIVSSYFKKLKLCK 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05350 187 Pfam Peptidyl-tRNA hydrolase PTH2 74 186 IPR002833 GO:0004045
Trre5g05350 187 CDD PTH2_like 73 186 - -
Trre5g05350 187 Gene3D Bit1 72 187 IPR023476 -
Trre5g05350 187 SUPERFAMILY Peptidyl-tRNA hydrolase II 73 186 IPR023476 -
Trre5g05350 187 MobiDBLite consensus disorder prediction 42 67 - -
Trre5g05350 187 PANTHER PEPTIDYL-TRNA HYDROLASE PTRHD1-RELATED 39 187 IPR042237 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05350 Trre-Chr5 54284812 54287024 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05350 K05969 - gmx:100788281 283.878