Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05347 ATGGCAACAAAACCAAAAGATAGTAATAGTAAAAGTGTTGTGGGGAATAAGGAGAAGAAAACACTATCTTCTAATTCTCCTATCACAACCACAAAAAGGACCACAAGACCATCAAGTGCAAGTGCTGTAGAGAGTTCCACCACCTCAACAGAAAAACAAATTCCAAACTACCTTAAACCAACACTTAGCTCACAACCAAGATCACAATCCTTCAAACTTACAAGAAATGATAATGCTCCAAACATTAAACCTCATCTAAATAGAAGAAGATCTTTTGATAAACCACCTTCACCTTCTAAATTACCAAAACAAATTCAACAATCTCCTTCAAAACTACAAAACAAAGTATTTGTTAGAAGCAGAAGTACTATACCTTCTTCTAAACCCAATTTAGAGAGAGTTTCACCAAAGACAGCAAAACAAAGTGCTAGTATCAAGAAGAGTAATCCTAAGAAAGATGTTGCAAAGAGTGGTACTAATGAAGAAACAACAGAAGGAAAGAATGTTGTTGAAAATGAACCAGAACTAGAAGTTAAAGAAGCTATAACAAATGAAGACAATGTTGGAGAAGTAGAAAAAGATGAGAATATTCAAGAAAATGATGATAAGGTTGAAAATTTAACTGAGATTAATCAACTTCATGATCATGTTGACTCTGAACTTGAACAGAATCAAGGACAGAATCAAAATGATCAAAATCTTGTACATGAAGAGAATGTGAAAGAGGTAATTCCTATAGTGTCAGAAGAAGAAGAAGCAAAAGAAGATCAAACCAAAGATGAACAAGAAGAGAATGAGAATGAGGTGACAAATACAAATCAAGAAGAAACAACTATTGATGAAAGTGATGAACAAGAAATAAACCATTCAACAAATGAAGAAGTTGTTGAGGTTGTAAAAGAAAAAGAAGAACAAGATCAAAAAGAAGAAGTTGTTGAGTTGGAGAAAGAAGAATTTGAAGGAGGAACAAGTGAAGTAATAGAAGAAAATGAAAAAGTGGAGAATGAGGTTGAAGAAACCAAGGTGGAATCAAGTGAGGAAAAACAAGAAGAAGAAAGTGGTGTGGTTCAAGGGAAAAGAGAGTCTTCTCAAGTTTCCAATGATAAGATTGAAGAAACTGCAAGCAGATTAATAGAAGAGAGAAAGAATAAAGTGAGAGCATTGGCTGGTGCATTTCAAACTGTCATTGATCATCAAAAGAAATGA 1206 0.3367 MATKPKDSNSKSVVGNKEKKTLSSNSPITTTKRTTRPSSASAVESSTTSTEKQIPNYLKPTLSSQPRSQSFKLTRNDNAPNIKPHLNRRRSFDKPPSPSKLPKQIQQSPSKLQNKVFVRSRSTIPSSKPNLERVSPKTAKQSASIKKSNPKKDVAKSGTNEETTEGKNVVENEPELEVKEAITNEDNVGEVEKDENIQENDDKVENLTEINQLHDHVDSELEQNQGQNQNDQNLVHEENVKEVIPIVSEEEEAKEDQTKDEQEENENEVTNTNQEETTIDESDEQEINHSTNEEVVEVVKEKEEQDQKEEVVELEKEEFEGGTSEVIEENEKVENEVEETKVESSEEKQEEESGVVQGKRESSQVSNDKIEETASRLIEERKNKVRALAGAFQTVIDHQKK 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05347 401 MobiDBLite consensus disorder prediction 100 145 - -
Trre5g05347 401 MobiDBLite consensus disorder prediction 254 270 - -
Trre5g05347 401 MobiDBLite consensus disorder prediction 1 81 - -
Trre5g05347 401 Coils Coil 297 318 - -
Trre5g05347 401 MobiDBLite consensus disorder prediction 283 357 - -
Trre5g05347 401 Coils Coil 246 275 - -
Trre5g05347 401 Pfam Plant calmodulin-binding domain 273 396 IPR012417 GO:0005516
Trre5g05347 401 MobiDBLite consensus disorder prediction 1 371 - -
Trre5g05347 401 MobiDBLite consensus disorder prediction 82 96 - -
Trre5g05347 401 MobiDBLite consensus disorder prediction 235 253 - -
Trre5g05347 401 Coils Coil 323 350 - -
Trre5g05347 401 MobiDBLite consensus disorder prediction 146 221 - -
Trre5g05347 401 PANTHER EMB|CAB62594.1 17 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05347 Trre-Chr5 54261863 54263068 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05347 - - tpra:123900074 411.764