Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05338 ATGGCTTCTATCTCCGGATCTCAATCGGGAGGCAAAATGGTTCGTCTCCGTCGTACCGCCGTTGCTAGAAACCGTACTCCATACTCCCGACCCGTTCCACCACAGCCACAGCCTCAGCCTCAAAGCCCTAATTGGCTTTCACGTTTCGTTATCTCTCCCACTCGTTTCATTGCTTCTGGTGCCGGAAAAATTCTGTCCACTGTTTTGGATCTCGAATCTTCTCCATCTTCTTCTTCTTCGGCTACTTCTTCCTCTTCTTCTTATGCCGATTCAGTTGCCGAGGAAGTTGGTGATCTTGATGATGTAAGTTACAACCCTTTTGAAGGTGAAGTTGCATTAAACCAGGAGCTCCAGCCATTGATTGCAAATAGTAAAAGCAAGAATACCATTGAGCAGCTACTAATGCAAGAGACATTCTCAAGGGAAGAAGGTGATAGGTTGATAAAAATAATAAGATCAAGAGTTGTGGATTCTCCTGCAAATGATGACAGGGTTACCAGGCCAAGGGATATATCCAACACGACTCTTGCAACTGCCTCACCTGAGCTCTGTAGTGCTGCTGTTATGGAGGCAAAGAAATGGCAGCTGGAAAAGAAGTCTGGATTAGATTCAAATTCTGATATTGGTTATGGAAGTCATAGTTTGAATTTGATTGCATTACCACATGCTCCCAAAGATGAAGGATCACCTGTAGATGTGGCTAAGTCGTATATGCGTTCACGTCCTCCATGGTCTTCTCCTTCTGTGGACCATACTAAGCCTCCAACACCGGCCGGAATTCAGCTCTTTAAAGAAGAAACACCACATCTATTTGGTGGCAGTTCTACGTCATCCTTGAAGTTTAAAAGGGATTCTTCTGCTACCGGGTCATGGAGTATTCAGGATGAGATAAGAAGAGTTAGATCCAGGGCAACAGAGGAGATGCTTAGAACAGTTCCCTCCTCAAAAATTGATTGGTCTGCATTTGCTGTGGAGCATAAAAATAATGTCAACTCATCTGCAATTGAAAATATTGGAGCTAGTTCAAGAGAAAAAGTACATAATTTTACAAATTTAGTAGATACTTCTGTAAACTTGGCCAGTGGATTGGGTTTTGAGGCCACTTCAGATTTGCAGAGTAAACTGGATGGGAACCAACCTGAACCTGTGCTGCCTGATGCAGCTAATATTATTTCTGAACAGAATCAGGGCTTTGTAGCTGTTCAGGAAACCAAAGGTACCCAAGATGACTGTAGAGAAATAACTACTTCAGTAGTAAGAGACGGATCCTCAGATAATATGCACAGGAATGGCGATCTTGTTATAGTCAATGGCACCGATGACACAAATGAGTCTAAGCACCAGCAAGACCTAGTTGAAGAAACTAGGGAAGTTTCAAATTCTAGATTACAAGATGGAAATCTCTCAGAATTAAAAGAGAAGGTTGGAATAGAAGATGCACTGGCAAATGGATTCCCCTCTTCAAGGCCCAGTGTCAATGCAGGGAAGGTGGCTGAACAGAACTCAAAAGCATTGAATAACGAATCGCTTACAGTCAATTCAAGTCAGGAGAGGATAGCTCAGGGTGTTCTTGAGCAAGAAACTTGCAAAATGTCTCATGAATCTACTGAGGTGCCTGATGTGAGTGCAGATGGTACCGTTGCTTCCAAGGATGACGGTATTGCCACCGGGTCACAAAACAGCTCCAGTGTACAGTACGAGGTTCAACAGGTCAGTTCTCAGCCAGGTCCAGAATCGGATGTCGTAGCCACAGCAACTAGCAGTATTGCTAAGCAAAAGGGTAAAAGATTGACCAGATACAACAGAAGGGGTAGCAAGGGTGTCAAATGA 1830 0.4372 MASISGSQSGGKMVRLRRTAVARNRTPYSRPVPPQPQPQPQSPNWLSRFVISPTRFIASGAGKILSTVLDLESSPSSSSSATSSSSSYADSVAEEVGDLDDVSYNPFEGEVALNQELQPLIANSKSKNTIEQLLMQETFSREEGDRLIKIIRSRVVDSPANDDRVTRPRDISNTTLATASPELCSAAVMEAKKWQLEKKSGLDSNSDIGYGSHSLNLIALPHAPKDEGSPVDVAKSYMRSRPPWSSPSVDHTKPPTPAGIQLFKEETPHLFGGSSTSSLKFKRDSSATGSWSIQDEIRRVRSRATEEMLRTVPSSKIDWSAFAVEHKNNVNSSAIENIGASSREKVHNFTNLVDTSVNLASGLGFEATSDLQSKLDGNQPEPVLPDAANIISEQNQGFVAVQETKGTQDDCREITTSVVRDGSSDNMHRNGDLVIVNGTDDTNESKHQQDLVEETREVSNSRLQDGNLSELKEKVGIEDALANGFPSSRPSVNAGKVAEQNSKALNNESLTVNSSQERIAQGVLEQETCKMSHESTEVPDVSADGTVASKDDGIATGSQNSSSVQYEVQQVSSQPGPESDVVATATSSIAKQKGKRLTRYNRRGSKGVK 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05338 609 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP1 1 570 - -
Trre5g05338 609 MobiDBLite consensus disorder prediction 552 594 - -
Trre5g05338 609 MobiDBLite consensus disorder prediction 1 45 - -
Trre5g05338 609 MobiDBLite consensus disorder prediction 437 470 - -
Trre5g05338 609 MobiDBLite consensus disorder prediction 595 609 - -
Trre5g05338 609 MobiDBLite consensus disorder prediction 443 460 - -
Trre5g05338 609 MobiDBLite consensus disorder prediction 529 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05338 Trre-Chr5 54175033 54182995 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05338 - - gmx:100799206 730.324