Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05335 ATGGGTTTGAGAAACTCTTCTGTTCTGTGCTTGGCACTTATGTTGTCTTTCTCTTCAGCCATTCATTGTTTGGACATAACCAAAACTTTGGGACAATACCCAGAATTCGCCACCTTTACCAAATACCTAACCGAAACCAAGTTGGTTGAACAAATTAACAGTGCTAAAGCCGTTACGATTCTTGCCCTTGAAGACAAGGCCTTGGCTTCTCTCTCTGGTAAACCAATTGACGCCATTAAAACCGTCATTGGGACCCAAGTTATAACTGACTTTTACAATGAGAAAAGACTTTTTGACGCCATTGGAAGCCATGAACAATTGCCTACACTTTCACCCGCTGCAGGTTTAGCTGCCAAAATCTACGTCAATCTTATTAACGAGGGTGAGGTGGCATTTAGTTCCGCTGTTGAAGGCTCAAAGGCCGATACTATGCTTGTTAGATCCGTTACAACTGAACCCGACGTTGTTTCTGTTCTTCAGGTTACTAAACCAATTGTTATGGTTGATGCTTCAACTCCATCAACAACAACTCCTTCAACATCAACACCAATTCCAGCTTCTGGTACAACCCCAACAGCATCACCTTCTGGTGCAACCCCAACAGCATCGCCTTCTGTGGGTTCTGAGTCACCTAAGAGCGGTGTTGCTAATGCACCTGCTCCTAGTGCCTCTTCTCGTACCACATTCGGATTCATTGGTGCTGCTATGGCATTTGCTTCCATTTTTGTCTCTTTATAA 738 0.439 MGLRNSSVLCLALMLSFSSAIHCLDITKTLGQYPEFATFTKYLTETKLVEQINSAKAVTILALEDKALASLSGKPIDAIKTVIGTQVITDFYNEKRLFDAIGSHEQLPTLSPAAGLAAKIYVNLINEGEVAFSSAVEGSKADTMLVRSVTTEPDVVSVLQVTKPIVMVDASTPSTTTPSTSTPIPASGTTPTASPSGATPTASPSVGSESPKSGVANAPAPSASSRTTFGFIGAAMAFASIFVSL 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05335 245 SUPERFAMILY FAS1 domain 22 113 IPR036378 -
Trre5g05335 245 Gene3D FAS1 domain 24 169 IPR036378 -
Trre5g05335 245 ProSiteProfiles FAS1/BIgH3 domain profile. 23 150 IPR000782 -
Trre5g05335 245 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7 174 IPR033254 -
Trre5g05335 245 MobiDBLite consensus disorder prediction 170 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05335 Trre-Chr5 54168089 54168826 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05335 - - tpra:123898372 311.612