Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05321 ATGGATAATCAACCGATTCAAAATCAACTTCAACCGCCACGTGACGAAGAAGATGAAGATGATTCTTCAAAGATGGAAGATGAAGAGTTGATTTCAAAGGTTAACAAGCTCATGGATAAAATCACTTCTTCTCCCGATAACCCTAAACCTAATGTTCTTCATGCTCTTGCATCCATTCTTGAAACTCAAGAATCAAAATACATGGATGAGAATGCTCATTCTTCTTCGACTAATGCCCGAGCTGCCCATAACATCGGTCGCCTCGGGAGTATACTTCGGGAGAACGATGATTTCTTTGAGTTAATATCTTTGAAGTTTCTGTCAGAAAGTGGATACTCAACTTCGGTTCGAGCTGCTGCTGTTAGACTTCTCTTGTGCTGTTCTCTAACTTGGATTTATCCTCATGTTTTTGAAGAACCAGTCCTTGAGAACTTGAGAAATTGGGCGACGGATGATAATACTAGGTTTTCTTCTGAGGAGCACGGTCCCTCAGAATCGGAAATGTTGAAAGCATATTCTACTGGACTACTTGCCGTGTGTTTGATCGGAGGAGGTCAGATAGTGGAAGATGTATTGACATCTGGCTTGTCAGCTAAGCTCATGCGTTATCTTCGTTTGCGTGTGCTGGGCGAGACAAGTGGCAGCCAGAAAGATATTAGTCATTTATCAGAGAACAAACATTCATCTGGGAATACTTCAGTGAGAGGTAGAGACGATGGTCGTGGAAGGTTTCGCCAGCTCCTGGAATCAAGTCATTTCGATGATACAAGGATGACTGAAGATGGATCTTTAGATGACCAAGCTCCTGATCGGGGTCAGGATAGAAGTGTTAGTGGGCAAGCTTGCCAAAAAGATACTTGGGTAGATGGTGAGCCACCTGATGGACTCAGTGAGGGTGCTGATGTCTGTGAGGTTGATTCTGATGGGGAGGATAGATGGCACTGTAGAGATATTCGTGATGGAAGAATAAAATATGGTGAGCATGAAGACAATGCTAGAGACGAATCTTCAAGGCGGCGCACTAACCGTGGATGGGGAAGATCTAGGGGGAAAGGAAGGGTCAATGAAGGGCCAGTAGAAGGTGAACCCGTTTTGTCATCTGCTGGTTCTGCCAATCGATTAGGACAGGGGCGGAGTGTTAGAGATAGGAGCTCGTCAAGGAATGCTGAAGTTAAGCGGGTACCTGATTCTAAGAAGACTCTTACCGGTACCATTTCTGAGGCTTTGATTTCCGAAAGAGAGTACAATGATGATTGTTTCCAAGAGTGCCGTATTGGAAATAAAGATATCTCCGATCTTGTTCGGAAAGCAGTCAAAGCCGCTGAAGCTGAAGCTAGATCAGCCAATGCACCTGAAGAAGCTGTCAAAGCAGCTGGCGATGCTGCTGCCGACCTTGTTAAAACTGCAGCTTCAGAGGAATATAAATCCACCAATGATGAAGAAGCAGCTGTTTTGGCTGCTTCGAGAGCTGCATCAACTGTTATCGACGCTGCATCTGCTGTTGAAGTGTCGAGGAGCTCTGTCTGCATCAATACTGAGACAGAGAATGTTAGTGGCAGAGAAACAGAATCTAGTGAGGATGTTGAAGATTATTTCATCCCAGACACTCCGACACTTACACAATTGAGGGAAAAATATTGCATTCAGTGTCTTTCGTTACTTGGAGAATATGTTGAAGTTCTTGGACCTGTATTGCATGAGAAGGGGGTTGATGTATGTCTTGGACTTCTGCAGCAAAATTCTAAACATCAGGAGCCATCCAAGGTTGCTTTTGTGTTGCCCGATGTCATGAAGCTGATATGTGCTTTGGCTGCCCATAGGAAATTTGCTGCACTATTTGTGGACCGCGGGGGAATGCAAAAGCTGCTTGCTGTACCTAGAATGGCTCAAACATTCTTTGGCCTTTCTTCTTGTCTGTTTACTATTGGTTCCCTACAGGGTATAATGGAACGGGTTTGTGCGCTTCCGTCCGATGTCATTTATCATGTGGTTGAGTTGGCTCTCCAACTCATTGAGTGCAATCAGGACCTAGCCCGGAAGAATGCAGCTTTGTTTTTTGCTGCCGCATTTGTTTTCAGAGCAGTTCTTGATGCTTTTGACTCTCAGAATGGGTTACAGAAATTACTGGGCCTTCTCAATGACGCTGCTTCCATAAGATCAGGAGTAACTTCTGGAGCTTTGGGCTCATCTAACTCGGGGTCGCTTCGAAATGATAGAACGTCATCTGCAGAAGGGCTGACATCATCTGAGAAGCAGGTCGCCTATCACACTTGTGTTGCTCTGCGGCAATATTTCAGAGCACACCTCCTATTATTAATAGATTCTATTCGTCCAAACAAAAGCAATCGTAGTGCTGCTAGAAATATTCCAAGTACAAGGGCTGCTTACAAGCCACTAGATATTAGTAACGAGGCAATGGATGCAGTATTCCTACAATTACAAAAAGATAGAAAGCTAGGTCCTGCATTTGTAAGAACAGGTTGGCGGGAAGTTGAGAATTTCTTGGCATCTAACGGACATATTACTATGTTGGAATTATGTCAGGCCCCACCTGTTGAGCGATATCTACATGATTTGCTTCAGTATGCATTGGGTGTTTTGCAAATTGTTACATTGGTCCCTAACAGTCGTAAGATGATTGTAAATGCAACATTAAGCACCAATCGTGCTGGTATTGCTGTAATTTTGGATGCAGCAAATATTGTCAGTAGTCACGTGGACCCTGAGATAATTCAACCAGCATTAAATGTTTTAGTAAACCTTGTCTGCCCTCCTCCCTCTATCAGCAATAAACCACCTGTAGTGTCACAAGGCCAGCAAATCTCTAATGGTGCTCTCTCGGAGACTAGAGATAGAAATGCTGAACGTAATATTACAGATCGGTCTGCTCAAGTCTCCGGCCATATTGATCCTAGGGAGAGGAATGGAGAGTCAAGTGCTGCTGCACTTGTAACCCAATCTGTGAATGCTACTCCCCAGACTCCCGTTCCCTCTGCAAGTTCAGGCTTAGTCGGTGACCGAAGAATTTCTCTGGGTGCAGGAGCACGCTGTGCCGGTCTTGCTACACAGATGGAACAAGGATATCATCAAGCAAGAGAGGCTGTTCGTAATAATAATGGTATAAAGGTTCTTCTGCATCTCCTCCAACCGCGTATATATTCACCTCCTGCTGCTCTGGACTGTCTTCGTGCTCTAGCTTGTCGCGTCCTGCTTGGATTGGCCAGAGATGATACTATTGCACATATATTGACAAAACTTCAGGTCGGGAAAAGACTGTCAGAACTAATTCGGGATACAGGCAGTACGACACTTGGAACAGAACAGGGTAGGTGGCAAGCTGAACTATCCCAGGCTGCAATTGAGCTAATTGGGATTGTGGCTAATTTAGGGCGTGCAAGTACATTAGTTGCTAGTGATGCAGCTACTCCTACATTAAGGCGCATAGAAAGGGCTGCTATAGCTGCTGCCACTCCTATTACTTACCCTTCAAGAGAACTCTTGCTCTTAATCCATGAGCACTTACAGGCATCTGGATTGGGACAAACCGCTTCTTTATTGCTTAAAGAGGCCCAGTTAACTCCTTTACCATCTTTACTTGCTCCATCTTCTCTTGCACAGCAACCCACAACACAGGAAGCTTCTTCAACACAAATTCAGTGGCCTTTTGGTCGTACTCCTAGTGGATTCCTCACTAGCAAATTAAAATCTAATTCAAAGAACGAGGATGCTTGCTGGAAAAGTGATGCTGTCTCTGCAAAGAAAAAGTCACTAACTTTTTCATCGTCTTTTGGTTCCAATACAAGACACCAAGTCGTTGACTCTCGGCAGTCATCAGCCAAAAAATGGTTACGTACTGGGAAAGAGTCTTCAGACACTAGTATGATAGAGGATCCATCTGAATCTTCAGTGCAACATAACGCTGAAACTGGTTCTCAGTTCAAGACTCCAATCACATTGCCGTCCAAACGAAAGTTATCGGATTTAAAGGATATATCAATGTTTTCATCATCTGCAAAGCGACTAAATGTTGGGGATCAGGGAATTCGCTCTCCTATTTGCTCAAGTGCAGTTCGTAAAAGCAGCCTTCTTGCTGATGCTACTGGGCTTTTCACACCAAGTAATATGAGGAGTCAACAAGGACGTTGCACAGCTGACTATGTGGATGAGAATCAGTACTGCATCTCAAATCTAGGTCACATGACACCATCCACCCAAGTAGTGAATGACCTTCAGCCCAATAACGCTGAGCGCGTGACACTAGATTCTCTAGTTGTTCAGTATCTTAAGCATCAGCATCGCCAATGTCCAGCTCCCATTACCACCCTCCCTCCAATATCTCTTCTACACCCACATGTTTGTCCTGAACCTAAGCGAAGCCTTGATGCCCCCTCTAATGTGACTGCTCGACTAGGTACCCGTGAATTTAAGTTTATGTATGGTGGAGTACATGGTAATCGCAAGGATCGTCAATTTGTTTTTAGTCGGTTTAGGCCGTGGCGCACATATCGGGACGATGCGGGGGCATTATTAACGTGCATTACATTTGTTGGAGACTCTTCTCATATTGCTGTCGGTAGCCACACCGGAGAACTCAAATTTTTTGATTCCAACAACAATAATGTGGTGGAGAGCTTCATAGGTCATGAGGCTCCTCTGACCCTAGTTCAGTCTTTTGTTTCTGGCGAGACCCAATTGTTGCTTTCTTCATGCTCTAAAGATGTTAAGCTCTGGGATGCAACATCAATATTAGGTGGTCCCACCCGTTCATTTGAAGGGTGCAAGGCTGCCAGGTTTAGTAATTCCGGAAAATCATTTGCTGCCTTATCATCAGAATCTGCAGGACGGGAAATCCTTTTATATGATATCCAAGAAGGCAAGTTAGAAAGAACATTGTCAGATACACTCGCTACTTCTACAGGGCGGGGTCATGCTTATTCTTTAATCCACTTTAGCCCTGATGATGAAAGGCTGCTTTGGAATGGTGTCTTGTGGGACCCACGAAGGCCTGAGCCTGTTTATCGTTTTGATCAGTTTACTGATTATGGAGGTGGAGGCTTTCATCCTGCTGGAAATGAGGTTATTATAAACTCCGAAGTCTGGGATCTGCGCAAGTTCAGGCTTCTACGTAGTGTAGCATCATTAGATCAAACAGCAATAACATTCAATGCTCGTGGTGATGTTATGTATGCAATCTTAAGAAGAAATCTTGAGGATGTAATGTCGGCCATGCATGCACGCCGCGTTAAGCATCCACTTTATTCAGCTTTTCGCACTGTGGATGCAATAAATTATTCTGACATTGCTACTATCCCTGTGGATCGTTGTGTTCTTGATTTTGCAACCGAGCCAACAGATTCATTTGTTGGTTTGATTACCATGGATGATCAGGGGGAGATGTATTCTTCAGCTAGATCATATGAAATTGGTCGTCGGAGGCCAACTGATGATGATTCTGATCCTGATGATGCTGAAAGCGAGGAGGAAGATGAAGATGACGACGACGATGATGATGAAGATCCTCTTTTAGGCCCTGGTTTTGGTGGGGAAAGCGACAGTGATGCTGATGACATGAGCAACGACGATGATAGTATAAGTGATCCCGATGATGATGATGATGATGACGACGATGGAGGTTTCATGATGAATGGTGACTTTGATGGAAACGGCATGATGGGTATTTTGACCGATGATGATGATAGTCAAGGACTTGAATCCGGTAGTAGCGACGATGATGACTTTTATAATATGTGA 5751 0.4432 MDNQPIQNQLQPPRDEEDEDDSSKMEDEELISKVNKLMDKITSSPDNPKPNVLHALASILETQESKYMDENAHSSSTNARAAHNIGRLGSILRENDDFFELISLKFLSESGYSTSVRAAAVRLLLCCSLTWIYPHVFEEPVLENLRNWATDDNTRFSSEEHGPSESEMLKAYSTGLLAVCLIGGGQIVEDVLTSGLSAKLMRYLRLRVLGETSGSQKDISHLSENKHSSGNTSVRGRDDGRGRFRQLLESSHFDDTRMTEDGSLDDQAPDRGQDRSVSGQACQKDTWVDGEPPDGLSEGADVCEVDSDGEDRWHCRDIRDGRIKYGEHEDNARDESSRRRTNRGWGRSRGKGRVNEGPVEGEPVLSSAGSANRLGQGRSVRDRSSSRNAEVKRVPDSKKTLTGTISEALISEREYNDDCFQECRIGNKDISDLVRKAVKAAEAEARSANAPEEAVKAAGDAAADLVKTAASEEYKSTNDEEAAVLAASRAASTVIDAASAVEVSRSSVCINTETENVSGRETESSEDVEDYFIPDTPTLTQLREKYCIQCLSLLGEYVEVLGPVLHEKGVDVCLGLLQQNSKHQEPSKVAFVLPDVMKLICALAAHRKFAALFVDRGGMQKLLAVPRMAQTFFGLSSCLFTIGSLQGIMERVCALPSDVIYHVVELALQLIECNQDLARKNAALFFAAAFVFRAVLDAFDSQNGLQKLLGLLNDAASIRSGVTSGALGSSNSGSLRNDRTSSAEGLTSSEKQVAYHTCVALRQYFRAHLLLLIDSIRPNKSNRSAARNIPSTRAAYKPLDISNEAMDAVFLQLQKDRKLGPAFVRTGWREVENFLASNGHITMLELCQAPPVERYLHDLLQYALGVLQIVTLVPNSRKMIVNATLSTNRAGIAVILDAANIVSSHVDPEIIQPALNVLVNLVCPPPSISNKPPVVSQGQQISNGALSETRDRNAERNITDRSAQVSGHIDPRERNGESSAAALVTQSVNATPQTPVPSASSGLVGDRRISLGAGARCAGLATQMEQGYHQAREAVRNNNGIKVLLHLLQPRIYSPPAALDCLRALACRVLLGLARDDTIAHILTKLQVGKRLSELIRDTGSTTLGTEQGRWQAELSQAAIELIGIVANLGRASTLVASDAATPTLRRIERAAIAAATPITYPSRELLLLIHEHLQASGLGQTASLLLKEAQLTPLPSLLAPSSLAQQPTTQEASSTQIQWPFGRTPSGFLTSKLKSNSKNEDACWKSDAVSAKKKSLTFSSSFGSNTRHQVVDSRQSSAKKWLRTGKESSDTSMIEDPSESSVQHNAETGSQFKTPITLPSKRKLSDLKDISMFSSSAKRLNVGDQGIRSPICSSAVRKSSLLADATGLFTPSNMRSQQGRCTADYVDENQYCISNLGHMTPSTQVVNDLQPNNAERVTLDSLVVQYLKHQHRQCPAPITTLPPISLLHPHVCPEPKRSLDAPSNVTARLGTREFKFMYGGVHGNRKDRQFVFSRFRPWRTYRDDAGALLTCITFVGDSSHIAVGSHTGELKFFDSNNNNVVESFIGHEAPLTLVQSFVSGETQLLLSSCSKDVKLWDATSILGGPTRSFEGCKAARFSNSGKSFAALSSESAGREILLYDIQEGKLERTLSDTLATSTGRGHAYSLIHFSPDDERLLWNGVLWDPRRPEPVYRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRSVASLDQTAITFNARGDVMYAILRRNLEDVMSAMHARRVKHPLYSAFRTVDAINYSDIATIPVDRCVLDFATEPTDSFVGLITMDDQGEMYSSARSYEIGRRRPTDDDSDPDDAESEEEDEDDDDDDDEDPLLGPGFGGESDSDADDMSNDDDSISDPDDDDDDDDDGGFMMNGDFDGNGMMGILTDDDDSQGLESGSSDDDDFYNM 1916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05321 1916 Gene3D - 1496 1820 IPR015943 GO:0005515
Trre5g05321 1916 MobiDBLite consensus disorder prediction 383 397 - -
Trre5g05321 1916 MobiDBLite consensus disorder prediction 1280 1294 - -
Trre5g05321 1916 MobiDBLite consensus disorder prediction 215 303 - -
Trre5g05321 1916 SUPERFAMILY ARM repeat 569 1128 IPR016024 -
Trre5g05321 1916 MobiDBLite consensus disorder prediction 725 746 - -
Trre5g05321 1916 MobiDBLite consensus disorder prediction 329 398 - -
Trre5g05321 1916 MobiDBLite consensus disorder prediction 215 230 - -
Trre5g05321 1916 PANTHER VPRBP PROTEIN-RELATED 21 1912 IPR033270 GO:0016567
Trre5g05321 1916 SMART Lish 1162 1194 IPR006594 GO:0005515
Trre5g05321 1916 MobiDBLite consensus disorder prediction 1295 1314 - -
Trre5g05321 1916 MobiDBLite consensus disorder prediction 1853 1880 - -
Trre5g05321 1916 MobiDBLite consensus disorder prediction 1819 1842 - -
Trre5g05321 1916 SMART WD40_4 1495 1535 IPR001680 GO:0005515
Trre5g05321 1916 SMART WD40_4 1538 1578 IPR001680 GO:0005515
Trre5g05321 1916 MobiDBLite consensus disorder prediction 932 948 - -
Trre5g05321 1916 FunFam DDB1-and CUL4-associated factor homolog 1 1493 1820 - -
Trre5g05321 1916 SUPERFAMILY WD40 repeat-like 1497 1729 IPR036322 GO:0005515
Trre5g05321 1916 ProSiteProfiles LIS1 homology (LisH) motif profile. 1162 1194 IPR006594 GO:0005515
Trre5g05321 1916 MobiDBLite consensus disorder prediction 1276 1314 - -
Trre5g05321 1916 MobiDBLite consensus disorder prediction 1803 1916 - -
Trre5g05321 1916 MobiDBLite consensus disorder prediction 1 28 - -
Trre5g05321 1916 MobiDBLite consensus disorder prediction 931 979 - -
Trre5g05321 1916 MobiDBLite consensus disorder prediction 231 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05321 Trre-Chr5 54056680 54065332 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05321 K11789 - gmx:100796030 2768.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05321 5 54056680 54065332 Trre5g05321 5 54056680 54065332 ECH