Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05318 ATGGCTGTCGTTGCGCCACCACTTCAGCCTCGTTACAGCTTCCCATCACCGAGTCAGTATCTCCGGGTCAATTCCGAGTCGAAATCCTCTCCGAATCGCTCCTCTTCATCCAAAAATTCCGAGGCAAAACCATCGTCGTCAAATACGGCTGTTTTCCGTGACGGCCTCCGTGTAACGGACGCTGAAACCATGGAGATCGTCTCCATGGTTCTTGTTGGTAAGGTTAACAAAACTCTCGTCTCTCTCATCAACAAAGTTGGCGCAACCGCCGTCGGTCTCTCTGGTATGGACGGAAAACTCCTCATCGCAAGTCCGAAATCCTCCGACCTAGGTTTCGTCGGCGAATTCGCGAGAGTAGATCCAACAGTTATCAGATCTCTCGTCGACAGTGGACATATTCCGGTTGTTACATCTGTTGCGGCTGATGAATCTGGACAACCGTACAACATCAATGCTGACACAATTTTGAGAGTTACTATTGGTAATAGTTCAAGCAGAACAAACCACTTTGATAAAGGTTGA 522 0.4847 MAVVAPPLQPRYSFPSPSQYLRVNSESKSSPNRSSSSKNSEAKPSSSNTAVFRDGLRVTDAETMEIVSMVLVGKVNKTLVSLINKVGATAVGLSGMDGKLLIASPKSSDLGFVGEFARVDPTVIRSLVDSGHIPVVTSVAADESGQPYNINADTILRVTIGNSSSRTNHFDKG 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05318 173 Gene3D - 40 158 IPR036393 -
Trre5g05318 173 PANTHER N-ACETYLGLUTAMATE SYNTHASE 49 155 - -
Trre5g05318 173 MobiDBLite consensus disorder prediction 14 48 - -
Trre5g05318 173 SUPERFAMILY Carbamate kinase-like 50 155 IPR036393 -
Trre5g05318 173 MobiDBLite consensus disorder prediction 1 48 - -
Trre5g05318 173 Pfam Amino acid kinase family 44 156 IPR001048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05318 Trre-Chr5 54045301 54047293 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05318 K00930 - gmx:100814183 178.718
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05318 5 54045301 54047293 Trre5g05318 5 54045301 54047293 ECH