Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05316 ATGCACGCCGTAGAAGAAGGTGGTGGTAGCGAAGACCAAAACGAACGCGTTCAGGAAGATATTTTCAACCTACGTCGACGCTGGGAACTCGCTTCCGTTCTCGATTTCATTCATGTGTTTAGTTCATTGCTTGGTAAGGATTTGAAGGTTTCAGCTGAAGAAATTGAGATCGGTCTTGTTAAGCCTAATGCTTCACTTGCTAAGCTTCATATTCAACTTTTGAAGGGAATACCACCTGTGAGTAGAACACTGGACGATTCTGATAAATGGGTGACTGCTCTTTCTAAGAAACTGACTACGTGGTGGCCATGGGTTGCCGAGGGGAAGAATCCACTTGTACCATCTAAAGGAGAGGAGATATCGAAGTACAAGGAGCTTGATCCATTGGATCGTTTACTACTGCTAAAAGCCCTCTGTGAAGTTAGAGCTGATCAACATGATGTGGTATCGTATATTAATGATGCTCTAAAAGAAGGAACTGAGATATCTTCTTTCCGTAAAGATGCCTTTGGAAGAGATGGAACTGGCACATCCTATTGGTACGATGCAAACACAAAAGCACAGAGTCACAGATTCTACAAGGAAACAATCACAACAGTCTCAACTCCAAACCGCAAGGGCAGACGTTCATCACTTCCCATTGTCAACTTTCAATGGGAAACACTTGCCTCAAATCTTGAAGAATTTTCAGAAGTAGCTGAAAAGTTATCATCTAGCAAGTCTCCTGTGGAAGCTTTTATTGGCAACAGGCTTCAAAGTGATGCTATTCCTGTTCTTGAGAAACTTCAAAAGAAGAAAGAAAGAGCATTGAAACAAAAACAGAGACAGGATAAGCTCTTGAAAGATTTCCAGAACTCTCAGTCTTCTGGAAATACACGCTCTTGTCGCACTCGAAGGCCTATTAATTACAGTTTCGAAGCTTATGATCGAACAATTAAGGAGGCTATACAGTTGACGAACAAAAGAAAAAAGTACACTCCTTCTGACCAAGATAAAAACGGAGGATCAGAAGATGACTCCAACGTAGATGTTTCCTCAGACAGTGATGATTCTAAAAGGGATGTGCAACCTATATCTGAGAGTGATGATACTGGTTATGAAAATGAGAATCACAGTAGCAGTGAGGAGAATGATGAACGTGAGAGTCAGATGGATAATTCAGAAGAACACTCAATCCATGCGGTTTCTTACCCCAAGGGGGTTCGCTGTAGTAAGCGGTTAGCCGGAGTCCCTGGCCATACTGTTCCAGAAAGCATGGGCTTGGTTGCAAAGCAAAGAGTGAGACAGAGACCAACTCGAAATACTGCCATAGAATCTACTGTTGTACCTGATTCAGAGGATGAGGAATTTGACGGAAAGACAGATCATTCCGAGTCTACTGTTGTACCTGATTCAGAGGATGAGGAAAATGAAGGAAAAACAGATCCTTCCAAGTCTAGTTAG 1443 0.4227 MHAVEEGGGSEDQNERVQEDIFNLRRRWELASVLDFIHVFSSLLGKDLKVSAEEIEIGLVKPNASLAKLHIQLLKGIPPVSRTLDDSDKWVTALSKKLTTWWPWVAEGKNPLVPSKGEEISKYKELDPLDRLLLLKALCEVRADQHDVVSYINDALKEGTEISSFRKDAFGRDGTGTSYWYDANTKAQSHRFYKETITTVSTPNRKGRRSSLPIVNFQWETLASNLEEFSEVAEKLSSSKSPVEAFIGNRLQSDAIPVLEKLQKKKERALKQKQRQDKLLKDFQNSQSSGNTRSCRTRRPINYSFEAYDRTIKEAIQLTNKRKKYTPSDQDKNGGSEDDSNVDVSSDSDDSKRDVQPISESDDTGYENENHSSSEENDERESQMDNSEEHSIHAVSYPKGVRCSKRLAGVPGHTVPESMGLVAKQRVRQRPTRNTAIESTVVPDSEDEEFDGKTDHSESTVVPDSEDEENEGKTDPSKSS 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05316 480 MobiDBLite consensus disorder prediction 319 338 - -
Trre5g05316 480 PANTHER REMODELING AND SPACING FACTOR 1 13 471 IPR028938 GO:0006355|GO:0031213
Trre5g05316 480 MobiDBLite consensus disorder prediction 446 480 - -
Trre5g05316 480 MobiDBLite consensus disorder prediction 281 298 - -
Trre5g05316 480 MobiDBLite consensus disorder prediction 268 298 - -
Trre5g05316 480 Coils Coil 259 279 - -
Trre5g05316 480 MobiDBLite consensus disorder prediction 345 388 - -
Trre5g05316 480 MobiDBLite consensus disorder prediction 319 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05316 Trre-Chr5 54037291 54041849 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05316 - - tpra:123899543 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05316 5 54037291 54041849 Trre5g05316 5 54037291 54041849 ECH