Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05293 ATGAACAACACATCATTCTTCGGAATCAAGTTTCATTCTTCTCTCAAAGGTTACAATGCTATCACTTTCAATAGTAGCAATCATTTGAAATTGAAAAGAAGTAGCTTATTGCAGAAAAGTAAAAGGTGGTGCACTGTATCTGCCAAACATGGAAACCCAATAAGGCAAGATTTTAGTTTTTGTTGCCAAAATGTAAACTTGTTAAGGTTACACCATGTTTCCATAAATGGGTTTAGGTTGAAATGTAGTACTATTAAGGAACCACGTTTTTCTTCTCCTTTCTTCACCCCATTGTGGAAAGAAGGGATTTTTTTTATTAGGGTATGTGTTTATACTGTTGTTATATCTGGTTTGTGTCTGTTGGTTTGGTTTGGTAGTAATAAAGTTAAGGGTTATGTTGAAGCCAAACTATTGCCTTCTGTTTGTTTAGTAATCAGTGAGCAAATTCAGCGTGATTTTCGCATAGGAAATGTTAGAAGAATCTCTCCTTTGAGTTTGACATTGGAGTCATGTTCATTTGGGCCTCATAAGGAGGAATTTTCATGTGGTGAGATTCCTATTGTTAAGCTCCGTATTCGTCCTTTTGCTAGTTTGATGAGGGGAAAGGTTGTGGTTGATGCAGTTTTGTCAAATCCAAGTGTATTGATTGTGCAGAAGAAGGACTATAGTTGGTTAGGTATACCGAATACTGAAGGCAGTATAAAAAGGAACTTGCCTACAGAAGAAGGGATCGATCATCGAACTAGAACAAGGAGGCTTGCACGAGAGGAAGCTGCGGTTCGGTCAGTGGGGGAACGAGATGATGCAGCTAGGGAAGCTGCAGAGATGGGTTACTTTTTTTCTGAGTCCTCCCAAGGCGATGATTTACAGGAGACTCGAGTTCATTCAAGAGGAATAACCGATTCCAATTCCTTTTTCTGCATGAATGAGGGGAAGCACAGTCACCATTGTGTAGACAACGGTGTTGATTATGAAATGAAACATGGAGATTTGGAAAAGCCTTTTAGAGTGAAGTTTCCTGGTTCATCAGGACTTAAGTTTTGGTCCAGACTCATAAAAAGGCATTGGAAGCACAAACTTAAGAGGAAGTCTAAGAGGAGTGACATCTCTGCATCTGGTGTTGCTATTAAAAGAAGAATTCTCGAAAACAGTGCATCAGCAGCACGTTCATACTTTCACAGTCATTCTATGAATCCTGATACACATTTGGTGAAAAATGATGTTGACAAAATTACAGAATCTGCTGGCTGTGGTGATGATGATAAATGTATTGTTGCAGAACATGTAGATAGGGTAGATGTTCTGCAGCCTGAAGACCTCACCAAGACGCTTCCCGTTACATTGGATGCTGTTCATTTCAGAGGTGCAACTGTGATGCTACTTGCATATGAAGACATTGAAGTTAGGGAGATGGAGAATGTCAATGGCTATGTGAAGTTTCGTAATCACTACAGCCATATAAATTTACACCTGAGTGGAGATTGTAAACCATGGAGGTCCGACGCTACATGCAAAGATGGCGGTTGGTTGTCTGCTAGTGTTTTTGTTGACATTACTGAGCAGAAATGGCATACAAATTTGAAAGTTGACAATCTTTATGTTCCGCTATTTGAAAGGATCCTAGAAATACCAATTACATGGTCTAAAGGGAGGGCCAGCGGTGAGGTTCACATGTGCATGTCTAAAGGTGAAACTTTCCCAAATCTTCACGGACAGCTTGATGTGACCGGATTGAACTTCCAACTATTGGATGCTCCATCATGTTTCTCCAACATATCAGCAAGTTTGTGTTTTCGTGTTCAAAGGATATTTTTACACAATGCATGTGGCTGGTTTGGCAGCATTCCTCTAGAAGCATCAGGGGATTTTGGAATTCATCCCGAGGAAGGAGAATTACATATTATGTGCCAGGTTCCTGGTGTTGAAGTGAATGCCTTGATGAGAACTTTCAACATGAAATCTTTCTTCTTCCCGCTAGCAGGATCAGTAACTGCTCTGTTTAACTGCCAAGGCCCACTAGATAATCCTGTTTTTGTGGGAACTGGAATGGTTTCTAGGACATTATCTTCTTCACATGTTGATACTCCTGCAACTGTAGCATCTGAAGCACTTGCTAAAAGTAAAGAGGCTGGCGCACTGGCAGCGTTTGATCGGGTGCCATTTTCATATGTATCTGCCAATTTTACTTTCAACACTGATAACTGTGTTGCCGATTTATATGGAATTAGAGCAAGCCTTGTGGATGGTGGTGAAGGTGAAGAGGATGAGACAGCAATAGATGTCAACTTTTCTGGAAGTTTAGACATTGAAAAAACCATGCTTCATTACATTCCCAACTATCATAGTTTGATGCCACTCAAACTAGGGGTATTACATGGAGAGACTAAAATTTCGGGATCTCTTTCAAAACCAACACTTGATATAAAATGGACTGCACCTTCTGCAGAAGGGTCTTTTAGTGATGCTAGAGGAGATATCTTAATCTCGCATGATTCCGTTACTGTTAATTCTGCTTCAGCTGCGTTTGATTTGTATATGAAAGTTCGAACATCGCATTCTGATGATATTTCTCTTACAAGAGAAGAGTTTTGTCCAAAAACTACTCCATTTACTTTTGATGGGATTGAGTTTGATCTGAATATGCATGGGTTTGAATTCTTTCGCTTGGTTACTACTTATACATTGGATTTTCCAAAACCTTTGCTCCTGAAAGCTACTGGAAGAGTAAAGTTTCAAGGAAAGCTTTTAGAACCTAGTTGCGCTATGTTGGAACAAAATTTTGATAAGGATGGGGAACTTCTACACATATTGGAGAATGGAAGTGCATATTGTCTCGTTGGTGAGGTTTCAATCTCTGGTCTCAAACTGAATCAATTGATGCTTGCACCTCAGCTGTCTGGGTTGTTGAGAATTTCTCCCGAGTGTATCAAGTTGGATGCCACTGGTAGGCCTGATGAAAGTCTTGAAGTGGAGTTTATTGGGCCACTGCAGTCCAGTGATGAAGATGGTCTGAAAAATGGACAAATGTTGTCTATTTCACTTCAAAAGGGGAAATTGGGGGCCAATATCAGTATCCAACAAAGTCATTCAGCTAGCTTGGAGATACAAAATTTTCAACTTGATGAGCTGGAGCTTGCTTCTCTCAGGGGAACTATTCAGAGGGCAGAAATCCAGGTTAATCTTCAAAAAAGAAAAGGACATGGAGTCCTATCTGTACTTCAGCCAAAATTCATTGGGGTTCTTGGTAAATCCCTAGATGTGGCGGCTAGGTGGATTGGAGATGTTATCACAATTGAAAAAGTTATCTTTGAACAAAGCAACAGCCATTATGAACTTCAAGGTGAATATGTGTTGCCTAGACCCTGCGATCGTAATCCTATTGATGGAAAAGGGGACGACTTTTTAAAAAGGCTAATTTCTAGGCATCTTGGTAGTGTTATATCCTCGACAGGTAGGTGGAGAATGAAACTTGAAGTATGTAGAGCGGAGATTGCTGAGATGCTTCCTCTTGCAAGGCTTTTTTCTCATAGCACGGATCCTACTGTTCTCTCAAGATCAAAGGATTTTTTTATTCAAAGTTTGCAGTCGGTCGGATTATATTCAACAAGCTCTCAACAACTGCTTGAGTTAGTAAGGGGGCACCATGCTCCATCACACGATGTTGTTCCTGAAGATATAAATCTGCCCGATTTATTTGATCTCAAAGGTCGCTGGCATGGCTCTCTTGATGCAAGTGGTGGAGGGAATGGAGACACCCTGTCAAAATTTGACTTTCATGGTGAGGATTGGGAGTTGGGAGACTACAAAACTCACCGCGTCTTGGCAGTTGGTGCTTACAGTAATGATTATGGTATGCACCTGGAGAATTTTCTAATCCAGAATGATAATGCCACCGTTCATGCTGCTGGAACTATGTTAGGGCATAAAAACAACCTTCATTTTGCCGTCTTAAACTTTCCTGTTAGTCTACTCCCAACTGTTGCACAGCTTGTTGAGTCTACCGCAACAGGTTCTGTTCGTTCTTTGGGGCCTCCGTTAGCAGCTATTAAGGGTATCTTGCACATGGAAGGTGATCTTAGAGGAAGTTTAATAAAGCCAGAATGTGATGTCCAAATAAGGCTCCTTGATGGTTCCATCGGTGGAGTTGATCTTGAGCGAGCAGAAGTTGTTGCTTGTCTAACATCAACCAGTCGTTTTCTATTCAATGCAAAATTTGAACCTATGATCCAACATGGTCATGTACTAATTCAAGGAAGCATTCCGGTTACTTTTGATCAAAGCAACATCTTACAGCAAGATGCAGAATTGGATAAGAGTTGGGCTACTTTGGTTCCTGATTGGGTGAGGGAGGAAAATAGAGGGACCACGGCTGATGCCAGAAACAATAGCATTTTTAGAGACAGAAATGAAGAAGTTTGGAACACTCAGTTAGCAAAAAGTCTGGAAGGTTTATATTCCCAAATTTTAGATGTCGATGAAGTCAGGGTAGATGCCGATATAAAAGATGGGGGAATGATGCTGATAACAGCTTTATCTCCTTATGCGAATTGGCTTCATGGCAAAGCTGATGTCATGCTTAAGGTGCGAGGTACGGTTGACCAACCATTGCTTAATGGCTATGCAATATTCCATAGGGCGTCTATATCTTCACCGGTGTTTCGGAAGCCGCTAACCAACTTTGGTGGTACTGTTCAAATGAAATCAAACAGGTTATCCATCACCTCACTGGAGAGTAGGCTAAGCAGAAAAGGGAAACTGCTTGTAAAAGGGAACCTTCCTCTCAGAACTAGTGAAGCAACCCTTGATGACAAAATTGAGTTGAAGTGTGATGTTCTAGAAGTGCATGCGAAAAATATTTTAAGTGGCCAGATTGACTCCCAGTTGCAAATAACTGGTTCAATATTGCAACCAATCATTTCTGGGAATATTAAACTTAGTCATGGAGAAGTATATTTGCCACAGGATGGGGGTAATGGTGATGGTCCAGCATTTGCTTCAAATCAATCTGCACTTTCTGCTGGTAGTGATAGTCAAGCATTTTCTTCAAGATATACTTCGACGACCAAATCTTCTCAATCCTCTACGTTTGTGAATGGATCAACTCATGTTGATAAGGACACAGAGAAAATGAAGATAAAACCAAGTATAGAAACCCACCTTAGTGATTTGAAGCTTGTGCTTGGACCAGAATTGAAGATAGTTTATCCTTTGATTCTTATATTTACTGTTAGTGGAGAGCTTGAGTTGAATGGTCTCTCCCATCCCAAATTTATAACACCTAAGGGCATACTGGTATTTGAGAATGGTGAAGTTGAGCTACTTGCAACACAGGTTAGATTAAAACGGGAACACTTGAATATTGCAAAGTTTGAGCCTGAGTATGGACTTGATCCAATGCTAGATTTAGCCTTGGTTGGATCTGAGTGCCAATATAGGATTCAAGGACGGGCTAGCAATTGGCAGGGCAGTGTGGAACAGGATACGCTTTCACCTAATGAGGCTGTCAAAAAATTAGAGAGTCAGTTAGCAGAAACCATTTTGAAAGGCAATGGTCAACTTGCCCTTGGAAAGCTTGCAACGGCTACTCTTGAAAAATTAATGCCACGTATAGAAAGGAAGGGCGAGTTTGGCAAGGCTAGGTGGAGGGTAGTATACTCACCTCAGGTTCCAAGTTTGAAATCTGCTGGTGCTACGGTAGATTCTTTTGATTTTCTTGCCAGTAATCTAACATTTGGAACAGATGTTGAACTCCAGCTCGGGAAACGCCTTCAGGCCAGAGTCATTAGGCAAATGAAGGAGTCGGAGATGGCAACACAGTGGTCCTTGAGCTATCAACTCACAAGTCGCTTGCATCTGCGCCTACAATCCTCTCCATTACCAGGCATATTTTTTGAATACTATGCTACAACCTAG 5913 0.4099 MNNTSFFGIKFHSSLKGYNAITFNSSNHLKLKRSSLLQKSKRWCTVSAKHGNPIRQDFSFCCQNVNLLRLHHVSINGFRLKCSTIKEPRFSSPFFTPLWKEGIFFIRVCVYTVVISGLCLLVWFGSNKVKGYVEAKLLPSVCLVISEQIQRDFRIGNVRRISPLSLTLESCSFGPHKEEFSCGEIPIVKLRIRPFASLMRGKVVVDAVLSNPSVLIVQKKDYSWLGIPNTEGSIKRNLPTEEGIDHRTRTRRLAREEAAVRSVGERDDAAREAAEMGYFFSESSQGDDLQETRVHSRGITDSNSFFCMNEGKHSHHCVDNGVDYEMKHGDLEKPFRVKFPGSSGLKFWSRLIKRHWKHKLKRKSKRSDISASGVAIKRRILENSASAARSYFHSHSMNPDTHLVKNDVDKITESAGCGDDDKCIVAEHVDRVDVLQPEDLTKTLPVTLDAVHFRGATVMLLAYEDIEVREMENVNGYVKFRNHYSHINLHLSGDCKPWRSDATCKDGGWLSASVFVDITEQKWHTNLKVDNLYVPLFERILEIPITWSKGRASGEVHMCMSKGETFPNLHGQLDVTGLNFQLLDAPSCFSNISASLCFRVQRIFLHNACGWFGSIPLEASGDFGIHPEEGELHIMCQVPGVEVNALMRTFNMKSFFFPLAGSVTALFNCQGPLDNPVFVGTGMVSRTLSSSHVDTPATVASEALAKSKEAGALAAFDRVPFSYVSANFTFNTDNCVADLYGIRASLVDGGEGEEDETAIDVNFSGSLDIEKTMLHYIPNYHSLMPLKLGVLHGETKISGSLSKPTLDIKWTAPSAEGSFSDARGDILISHDSVTVNSASAAFDLYMKVRTSHSDDISLTREEFCPKTTPFTFDGIEFDLNMHGFEFFRLVTTYTLDFPKPLLLKATGRVKFQGKLLEPSCAMLEQNFDKDGELLHILENGSAYCLVGEVSISGLKLNQLMLAPQLSGLLRISPECIKLDATGRPDESLEVEFIGPLQSSDEDGLKNGQMLSISLQKGKLGANISIQQSHSASLEIQNFQLDELELASLRGTIQRAEIQVNLQKRKGHGVLSVLQPKFIGVLGKSLDVAARWIGDVITIEKVIFEQSNSHYELQGEYVLPRPCDRNPIDGKGDDFLKRLISRHLGSVISSTGRWRMKLEVCRAEIAEMLPLARLFSHSTDPTVLSRSKDFFIQSLQSVGLYSTSSQQLLELVRGHHAPSHDVVPEDINLPDLFDLKGRWHGSLDASGGGNGDTLSKFDFHGEDWELGDYKTHRVLAVGAYSNDYGMHLENFLIQNDNATVHAAGTMLGHKNNLHFAVLNFPVSLLPTVAQLVESTATGSVRSLGPPLAAIKGILHMEGDLRGSLIKPECDVQIRLLDGSIGGVDLERAEVVACLTSTSRFLFNAKFEPMIQHGHVLIQGSIPVTFDQSNILQQDAELDKSWATLVPDWVREENRGTTADARNNSIFRDRNEEVWNTQLAKSLEGLYSQILDVDEVRVDADIKDGGMMLITALSPYANWLHGKADVMLKVRGTVDQPLLNGYAIFHRASISSPVFRKPLTNFGGTVQMKSNRLSITSLESRLSRKGKLLVKGNLPLRTSEATLDDKIELKCDVLEVHAKNILSGQIDSQLQITGSILQPIISGNIKLSHGEVYLPQDGGNGDGPAFASNQSALSAGSDSQAFSSRYTSTTKSSQSSTFVNGSTHVDKDTEKMKIKPSIETHLSDLKLVLGPELKIVYPLILIFTVSGELELNGLSHPKFITPKGILVFENGEVELLATQVRLKREHLNIAKFEPEYGLDPMLDLALVGSECQYRIQGRASNWQGSVEQDTLSPNEAVKKLESQLAETILKGNGQLALGKLATATLEKLMPRIERKGEFGKARWRVVYSPQVPSLKSAGATVDSFDFLASNLTFGTDVELQLGKRLQARVIRQMKESEMATQWSLSYQLTSRLHLRLQSSPLPGIFFEYYATT 1970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05293 1970 PANTHER EMBRYO DEFECTIVE 2410 88 1969 - -
Trre5g05293 1970 Pfam TamB, inner membrane protein subunit of TAM complex 1576 1956 IPR007452 GO:0005886|GO:0009306
Trre5g05293 1970 Coils Coil 1045 1065 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05293 Trre-Chr5 53853402 53866692 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05293 - - psat:127086149 3141.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05293 5 53853402 53866692 Trre5g05293 5 53853402 53866692 ECH