Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05292 ATGGTTTTACAGTCTCTGTGTCTATGTCCTTCCAACAATTCTTCTCTTATTCTTCCCAACAACAACCTTATCTTCAGGAACAACAACAACAACAACAGTAATAACAGTACAAGGTTAATCCTTAACCAAAACAAATCCGACCAAAAAAGGGACTTTTCAACTTCTTGTTCTTCTTCTATAAAACCCAGAAGGGATTTGCTTCTGTTAGGCCTCACTTCACTATCTTTAACATGCCTTCCATTTTCTGTAGCTCTTGCTGGAGAAGAAGAGCCAAAAATGGCTTCTTTTTTAGATGAAACCAATGCTTATTCTTATCTCTACCCTGTTGAGCTTCCCTCTAAAAAATTTGTCTTCAAATGGGTAGAATCCCGAAAGCCTGAACGATATTCATCAGCTGCACCACTTTCTCCTAATGCGCGGCTGCGTATTGTGTCTGAACGTGTTGATATCTTTGATAATCTCATCATTTCCGTCACGATAGGCCCTCCAAGTGCAGGCCTTATAAACTTGAAGGATAAGAGCAAATGGACTGCAAAAGCTGTTGCTGATTCAGTTTTAGCTGAGAAATCTTCACTGGTAACCTTTACCTCAGCTCAGCGCTCAGCTGAGAGTTCAGTTCTCGATGCACATTCTGATGAAATTGATGGTGTACCTTACTGGTATTATGAATACCTTATTCGTAAATCGCCTAATACAATGTCTGAAGAATCAGGAATTTACCGGCATTATCTTGCTTCAACAGCAGAAAGAGATGGTTATCTGTACTCAATCAGCGCTTCAACCCTCAGCCCGCAGTGGAAAAAAATGGGACCTATATTTGAAAAGACAGTGAGTTCATTCCGCCTTGTCAGTCCAACAGAAAATTATGTTCCTCCTTTCAAAGATCCCTGGAGATTTTGGTGA 903 0.4031 MVLQSLCLCPSNNSSLILPNNNLIFRNNNNNNSNNSTRLILNQNKSDQKRDFSTSCSSSIKPRRDLLLLGLTSLSLTCLPFSVALAGEEEPKMASFLDETNAYSYLYPVELPSKKFVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPPSAGLINLKDKSKWTAKAVADSVLAEKSSLVTFTSAQRSAESSVLDAHSDEIDGVPYWYYEYLIRKSPNTMSEESGIYRHYLASTAERDGYLYSISASTLSPQWKKMGPIFEKTVSSFRLVSPTENYVPPFKDPWRFW 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05292 300 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 82 282 - -
Trre5g05292 300 Pfam PsbP 156 281 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Trre5g05292 300 PANTHER - 42 282 - -
Trre5g05292 300 SUPERFAMILY Mog1p/PsbP-like 95 282 IPR016123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05292 Trre-Chr5 53849718 53852849 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05292 - - psat:127086150 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05292 5 53849718 53852849 Trre5g05292 5 53849718 53852849 ECH