Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05268 ATGATGTCCAAGTTTCAATATCTTTCTTTCCAATTCCTAATCATCATCCTCCTCTCAACACTGTTCATCCACTTCTCTCAAGCTGACGTTGGCACTGCTTCCCATTATAGCCCTCCCTTTTTACCGACAGCGTGTTTCGGGGGAGATGCGTCGCAATTTCCGTCGAGCAACATGTTTGGTTCAGCTGGAGAAGGTATATGGGACAATGGAGCAGCATGTGGGAGGCTTTATGAGGTTAGATGTATAAGTGCAGCTGTTCCTAGAACTTGCATTCCTGGTCAAACAATTCAGATTAAGATTGTTGACAGGGCACAATCCTCTGCTTCTAGGCCTTCATCAAGTGATACTTCTATGGTCCTCTCCACTACTGCCTTTCAAATCATTGCAAATGTTTCTTCATCTTTGATTAACATTGAATTTCAGCAGGTTTGA 432 0.4329 MMSKFQYLSFQFLIIILLSTLFIHFSQADVGTASHYSPPFLPTACFGGDASQFPSSNMFGSAGEGIWDNGAACGRLYEVRCISAAVPRTCIPGQTIQIKIVDRAQSSASRPSSSDTSMVLSTTAFQIIANVSSSLINIEFQQV 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05268 143 Pfam Lytic transglycolase 66 139 IPR009009 -
Trre5g05268 143 CDD DPBB_EG45-like 29 141 - -
Trre5g05268 143 SUPERFAMILY Barwin-like endoglucanases 16 143 IPR036908 -
Trre5g05268 143 Gene3D - 26 143 IPR036908 -
Trre5g05268 143 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 7 142 - -
Trre5g05268 143 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 42 143 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05268 Trre-Chr5 53683095 53684621 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05268 - - gmx:100803494 213.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05268 5 53683095 53684621 Trre5g05268 5 53683095 53684621 ECH