Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05255 ATGAGATTAGTAAAAGGAAGTAAAGTGGAGATCCTTGTCAATACACATGTACTTGGAGTGGAATGGCATTGTGCCCGTATTATTTCCGGTAACGGGCACACGTATGAAGTTGAGTATGACTATTCTAGTGCGACCGATAAGGCTCTTTCGAAGAGAGTTCCAAGGAAGGCCATTAGACCATGTCCCCCTGCTATGGAAAATATTGGAAGTTGGAGAGTTAATGATATTGTGGAAGTCTGGAATGCTGAATGTTGGAAAGAAGCTACTGTATTGAAGCACATGACTGGAGAATTCTACTTGTTAAGGTTGCACGGATCTTGCACGGAGCTGAAGATACATGAAGATGACATGAGGATATGCCAATCATGGCTTAATGGTCGATGGATCATAAGTCCGAAGGGACCAGCCAAGTCTGGAGTTGCGAAGTTCAGCCGGAATTTGATTTCAAACAACAATAAGACAATGCCCGAAGTTCAGAACACTAAAGATGTTTGTTCACCAGGATTGGATGCCAGCTGTCTCCATCAACCCTCACCTTCAACATTGAAAAGAGTGTTGTCTCATGACTCATCTCATATTGAGGAATATCCCAGAAAAAAGAGGGCTGTTGTGATTACGAGTGGGTCTAAAAGACTCAAAGCGGTATCCACTGCTCCATTTCTGGAAAAGGTAGATGCTATTGCTTACCCACAGAATAATATGGGTGAAAATTACATGCATTATTCCTTCCCTAATTGTACCAATCAATTATATGAATCGAGGAAACCTTGTAATGTTACAACACACTTTCCTGAAACCATTGAAAAACCAGATTATTCTTATAGTAATCTGAGTTCAGTTGGCAGCTGTAGTGTAATAAGCGGTAGTGCAAATGAATTTTTTGGTGATACGTTAGCAGGTCCTTGCCAAGATGATAAAGACACCCTTCGCAGTGATGCAGAATCTCTAAATGTTGAAGATATGGATGAGTTTTATGGTGATATGTTACCAGGTCCATGCCAAAGGGATGAGGATACCATCTGCACTGATGCAGCAGAATCACTAGATGTGGACGAAGGATGCACTGTTCTTCCAAAAGAGGTTGTGGAAGAAAGAATCCATAGGTTAGAGTTGAATGCTTATCACTGTACCTTAGAGGCAATGTATACTTCTGGTCCTTTAAGTTGGGAAAAAGAAGAATTATTGACTAATCTTCGTATTTCACTCAATATCTCAAACGATGAACACTTGAGGGGGATAAAGTCCTTAGTTTCAGCTGGTCAGAATTTTTAA 1272 0.4064 MRLVKGSKVEILVNTHVLGVEWHCARIISGNGHTYEVEYDYSSATDKALSKRVPRKAIRPCPPAMENIGSWRVNDIVEVWNAECWKEATVLKHMTGEFYLLRLHGSCTELKIHEDDMRICQSWLNGRWIISPKGPAKSGVAKFSRNLISNNNKTMPEVQNTKDVCSPGLDASCLHQPSPSTLKRVLSHDSSHIEEYPRKKRAVVITSGSKRLKAVSTAPFLEKVDAIAYPQNNMGENYMHYSFPNCTNQLYESRKPCNVTTHFPETIEKPDYSYSNLSSVGSCSVISGSANEFFGDTLAGPCQDDKDTLRSDAESLNVEDMDEFYGDMLPGPCQRDEDTICTDAAESLDVDEGCTVLPKEVVEERIHRLELNAYHCTLEAMYTSGPLSWEKEELLTNLRISLNISNDEHLRGIKSLVSAGQNF 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05255 423 Gene3D ENT domain 357 420 IPR036142 -
Trre5g05255 423 Pfam ENT domain 364 414 IPR005491 -
Trre5g05255 423 SMART ENT_2 362 423 IPR005491 -
Trre5g05255 423 SUPERFAMILY ENT-like 362 417 IPR036142 -
Trre5g05255 423 Pfam Agenet domain 6 63 IPR008395 -
Trre5g05255 423 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 3 391 - -
Trre5g05255 423 SMART agenet_At_2 69 125 IPR014002 -
Trre5g05255 423 SMART agenet_At_2 1 66 IPR014002 -
Trre5g05255 423 ProSiteProfiles EMSY N-terminal (ENT) domain profile. 362 423 IPR005491 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05255 Trre-Chr5 53598888 53600320 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05255 - - cam:101515344 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05255 5 53598888 53600320 Trre5g05255 5 53598888 53600320 ECH