Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05239 ATGGCAAGGCGGCCACGTAGGATTGTTGAACCGATGAAACATCTTCCGTGTGTGACTGAGTTGTTAGCAGCGGGGGTTAAGTTTAAAGTGAATACTGACAGTGAGTGTTTACTTGATTTGAGGTTTTCGGGACAAGTTCTTGAAATACCTCAATTGAAAGTTGAGGATTGGACGGAGATGTTGTTTCGAAATATGGTTGCTTTGGAGCAGTGTCATTACCCTTATGAGTCTTATATTACTGATTATGTTGCTGTTTTGGATTTTCTTGTTAATACTGGTAGGGATGTGGATATACTTGTTGGGAAGAAAATACTTGTTAATTGGCTTGGGGATAGTGATTCTGTGGCTAACTTGTTTAATAGTCTTTGGAAAAATGTTACGCATTCGGAATTCAGCGCGATTATTGCAATAGCCCTTGGCAAACTGCTGCCTCCATTGCTGGAATTGCAATCCTTGCTCTCACTTTACTTCAATCAGTTTGTTCTGTCTTGCAAGTTTTACAGCACTAAATCGACTCATATTAATTTGATTGAACATCGAAGAATTATGTGGCAAGATTGTTGA 564 0.3918 MARRPRRIVEPMKHLPCVTELLAAGVKFKVNTDSECLLDLRFSGQVLEIPQLKVEDWTEMLFRNMVALEQCHYPYESYITDYVAVLDFLVNTGRDVDILVGKKILVNWLGDSDSVANLFNSLWKNVTHSEFSAIIAIALGKLLPPLLELQSLLSLYFNQFVLSCKFYSTKSTHINLIEHRRIMWQDC 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05239 187 PANTHER BNAC04G53230D PROTEIN 10 132 - -
Trre5g05239 187 Pfam Plant protein of unknown function 11 129 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05239 Trre-Chr5 53527740 53529004 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05239 - - gmx:100785283 197.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05239 5 53527740 53529004 Trre5g05239 5 53527740 53529004 ECH