Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05209 ATGGGGAAAGGTGGATCTGTTAGCGATGGAGTAATGAAAAAGATCATTCTCTCATACACATACGTAGCAATATGGATCTTTCTATCATTCACCGTTATCGTTTACAACAAATACATCTTAGACAAAAAGATGTACAATTGGCCATTCCCAATTTCTCTAACAATGATTCACATGTCTTTCTGTGCAACCCTAGCTATTCTTCTCGTTCGTGTTTTCAAATTCGTCGATCCTGTTTCAATGTCTCGTGATGTTTATCTCTCTTCCGTTGTTCCAATTGGAGCACTTTACTCTCTTTCTCTCTGGCTTTCTAATTCCGCATACATTTATCTTTCTGTTTCTTTCATTCAAATGCTTAAAGCTCTTATGCCTGTTGCTGTTTATTCAATTGGTGTTGCTTTCAAAAAAGAATCTTACAAAAATGATACTATGTTTAACATGTTATCTATTTCAATGGGTGTTGCTGTTGCTGCTTATGGTGAAGCTAGGTTTGATACATGGGGTGTTATTCTACAGCTCGGTGCCGTTGCATTCGAGGCCACGCGATTGGTTATGATTCAAATCTTGCTTAATTCTAAAGGAATTTCATTGAATCCAATTACTTCTTTGTATTATGTTGCACCTTGTTGTCTTGTTTTCTTGTCTGTTCCTTGGATTCTTGTTGAGTATCCGATTTTGAAAGAGACTTCGAGTTTTCATTTCGATTTTGTTATTTTCGGGACTAATTCTTTGTGTGCATTTGCTTTGAATCTTGCTGTTTTTCTTCTTGTTGGGAAAACATCTGCTTTGACAATGAATGTGGCTGGTGTTGTTAAAGATTGGCTTTTGATTGCTTTTTCATGGAGTGTGATTAAGGATACTGTTACGCCGATTAATTTGTTTGGATATGGACTTGCTTTCTTGGGTGTGGCTTATTATAATCATTCAAAGTTGCAGGCACTTAAAGCTAAAGAAAAAGAGGCACAGAAGAAGGTTGCACAGGCTGATGAAGAAACTGGAAGGTTGCTTGAGGATAGGGAAGGTGATGGGTCAAGGGAAGAGAAATGA 1044 0.3736 MGKGGSVSDGVMKKIILSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAILLVRVFKFVDPVSMSRDVYLSSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVAFKKESYKNDTMFNMLSISMGVAVAAYGEARFDTWGVILQLGAVAFEATRLVMIQILLNSKGISLNPITSLYYVAPCCLVFLSVPWILVEYPILKETSSFHFDFVIFGTNSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSKLQALKAKEKEAQKKVAQADEETGRLLEDREGDGSREEK 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05209 347 Coils Coil 310 330 - -
Trre5g05209 347 MobiDBLite consensus disorder prediction 324 347 - -
Trre5g05209 347 PANTHER SOLUTE CARRIER FAMILY 35 19 314 - -
Trre5g05209 347 Pfam Triose-phosphate Transporter family 20 306 IPR004853 -
Trre5g05209 347 SUPERFAMILY Multidrug resistance efflux transporter EmrE 64 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05209 Trre-Chr5 53212392 53213435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05209 1 347 Organic Solute Cotransporters AT5G25400 85.920 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05209 - - gmx:100809504 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05209 5 53212392 53213435 Trre5g05209 5 53212392 53213435 ECH