Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05199 ATGTTCGTTCCACCTTGGCTCTATCAGATTCTCGCATGTATGGGAGGTTGTCTTGGATGTTTCTCAAAGCCTCTTGTAATTATTTCAATGGGTGAGGCAGATGCATCTAAGGGACAAAATACTCAAGGACAAACAATGAGCATAGACAACAGATCAGAAGATTTTTGGAGTAGCAGTGCTATTGAATTAGATCACGGGGCCACTCAGTCCCAGAGAAGTTTCTCATCGATCGCCGTGTCAAACCATCCTTCTGATCCTCAAAGTAGTGACGGCATTCAGACTGATCCTCCAGAATTTGTCAATCATGGTCTTCTTCTTTGGAACCAAATGAGGCACCATTGGGTTGGAAATAAAAGGTCCGAGCGTCTGAAACAAGTTGGAGAACCCAAAATAAGTTGGAACGCCACCTATGAGAGTCTACTTGGGACCAACAAGCCTTTCCCCCAGCGCGTTCCTCTTGGTGAAATGGTTGAGTTTCTTGTTGATATATGGGAACTAGAGGGCATGTATGATTGA 516 0.4438 MFVPPWLYQILACMGGCLGCFSKPLVIISMGEADASKGQNTQGQTMSIDNRSEDFWSSSAIELDHGATQSQRSFSSIAVSNHPSDPQSSDGIQTDPPEFVNHGLLLWNQMRHHWVGNKRSERLKQVGEPKISWNATYESLLGTNKPFPQRVPLGEMVEFLVDIWELEGMYD 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05199 171 MobiDBLite consensus disorder prediction 72 93 - -
Trre5g05199 171 Pfam Protein of unknown function (DUF4050) 130 171 IPR025124 -
Trre5g05199 171 Pfam Protein of unknown function (DUF4050) 62 125 IPR025124 -
Trre5g05199 171 PANTHER OS07G0479600 PROTEIN 3 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05199 Trre-Chr5 53141489 53145037 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05199 - - tpra:123898289 337.035