Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05174 ATGCAGAGACGAAGTCCTCCCAAGCATAGACACGATGGGACTTCGCCACTGCCTCTTGGCATGGATTGGAGTCCTGCACCGAGAAAATGGAATGGGGGGGATACCGAATGGCCACACAATCATCGTACCGGTTGGAGTTATTGCATCGTAATACCTTCTTGGGTTTTTGTACCAAAATCAAGGAACTCGGATCCTATAGTGTTCTACAGGCTCCAAGTTGGTATACAATCACCAGAAGGGATTACAAATATCCATGGAGTACTAAGAAGGTTCAATGATTTTCTAAACTTGTATGTTGATCTTAAAAAGGAGTTTCCCAGGAAAAATATCCCTCCAGCGCCACCCAAGGGACTCTTACGATTGAAAAGCCGAGCTTTGTTGGAAGAGAGAAGGCGCTCTTTGGAGGAGTGGATCACCAAAATATTGTCTGACATTGATATATCAAGATGTGCACCTGTGGCCTCGTTTCTTGAGCTAGAAACTGCTGCTAGATCTTCATTTCAAGATGCAAGCCAGCAGAATTCAGTAAAAGATCCTGATTCCAATAGCAGAGATTATTCGGTGCAATCACCTCTCCATTCGAGCTTATCATTAGCTGCTGGTAGTTCATCTGTTGCGTCAGATTATGGTAGTGATACTCCATATGATGCATCGGAGGTAGGAACTCCTAGAATTGGACGGGATGATAATTCTGAAGTTGGCACAGATGACCTGACACTAGATGAAGATACAACAAATCCAATAGAAAAACTTGTTAAATATGGCATATCAAATATTGACGAGGGTTTGTTTATGGGTCAGACTATTCTAGAGCAATTAGAAGGACTTCCTAGGCATAAAGTGAATGCCAGACATGTGAACAATGTTATGGGGAAGGACAGAAGTAATGGTAATTCATATGATTCTTCACTTCTAGCTAATAATACCATGGAGCTTTTTTCTGAGCCTGGGCATGCTAAAGTTTTTGGTCACATTCGTAAGCTTTCAAATGAGAGTGTTGGAAGTGATGGAAGCTCAGTGCGAGGTAGTGACATGTCTAATTTTGGGATTCCAAATTCATCTGGCAATGGCTCTGTCGACCTTCCTGGATATGCTTCGGTTTCACGAGAAACAGATATTGTGGGCCACACAAAGTTGAAAAGTACCGGCGATGCTCAATTAGTCCTTCCGCTAGATCAACGCAATAAACTGAACAGAATTCTTTCAACCATGCAAAGAAGGCTAGTCACAGCGAAAACTGATATGGAGGACCTTATAGTTAGATTAAATCAAGAAGTAGCTGCAAAGGATTTTCTTACGACAAAGGTCAAGGATTTGGAAGTTGAACTAGAAACTACCAAACAGAAAAATAAGGAGAACTTGCAGCAAGCTATTCTGATTGAGAGGGAAAGATTTACCCAAATGCAGTGGGATATGGAGGAACTTAGACGAAAGTCGCTGGAAATGGAAATGAAACTTAAGTCTAAATCGGATGGAAATGTTGGTCAGGATTTGACAAAGGAATTTGTTCAGCAGAACGATGTGCTGTTGCAGGATTTAGATGCTGCTAGAGAGCAGCTGGAAGTTTTGTCAAAACAGTATGGAGAGCTAGAAGCAAAATCCAAAGCAGATATTAAAGTTCTGGTTAAAGAGGTCAAATCTCTCCGTAGTTCCCAAAGAGAATTGAAGAAGGAACTTAGCGAGTCCATAAAGGAGAAATGTGAAGCTGAGAAACTACTACTTCATGAAAGAGAGAAGAGGGAACGAGCAGAAACTGCTTGGAGGGAACAGCTTGAGAAATGTGGGGTTCTTTTTAAGCAGCTTCAAGAGTGCAATTTCAATCTTCCTTACGAAGACGATGATAGGACATTCTTGCATTCATCATCATCATCATCATCATCATCATTAAATGACGCTTTTAATCAACTAAAGACATCTGATGACCAAATTGACATCCTACTAGCAGAGGTTGAAAACTTAGAGAAGGACTACAGAAGTGCAGCTTCTGACGAAGATAAAACCAATAATGGTATAAAAGATGGTGTAATCTGTGGTGATAAGGTGAGAAAGATCATAGCAGATTTGTTCATTGATAATGTTAGATTGAGAAAACAGACAAACCGCGTTGCAAGACATGCTCTCAAATTGGATAGTACAACGAGTGTTGATTCTCCTTCAATCGAAAATGTAACAAATATTTAG 2181 0.4067 MQRRSPPKHRHDGTSPLPLGMDWSPAPRKWNGGDTEWPHNHRTGWSYCIVIPSWVFVPKSRNSDPIVFYRLQVGIQSPEGITNIHGVLRRFNDFLNLYVDLKKEFPRKNIPPAPPKGLLRLKSRALLEERRRSLEEWITKILSDIDISRCAPVASFLELETAARSSFQDASQQNSVKDPDSNSRDYSVQSPLHSSLSLAAGSSSVASDYGSDTPYDASEVGTPRIGRDDNSEVGTDDLTLDEDTTNPIEKLVKYGISNIDEGLFMGQTILEQLEGLPRHKVNARHVNNVMGKDRSNGNSYDSSLLANNTMELFSEPGHAKVFGHIRKLSNESVGSDGSSVRGSDMSNFGIPNSSGNGSVDLPGYASVSRETDIVGHTKLKSTGDAQLVLPLDQRNKLNRILSTMQRRLVTAKTDMEDLIVRLNQEVAAKDFLTTKVKDLEVELETTKQKNKENLQQAILIERERFTQMQWDMEELRRKSLEMEMKLKSKSDGNVGQDLTKEFVQQNDVLLQDLDAAREQLEVLSKQYGELEAKSKADIKVLVKEVKSLRSSQRELKKELSESIKEKCEAEKLLLHEREKRERAETAWREQLEKCGVLFKQLQECNFNLPYEDDDRTFLHSSSSSSSSSLNDAFNQLKTSDDQIDILLAEVENLEKDYRSAASDEDKTNNGIKDGVICGDKVRKIIADLFIDNVRLRKQTNRVARHALKLDSTTSVDSPSIENVTNI 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05174 726 MobiDBLite consensus disorder prediction 167 211 - -
Trre5g05174 726 Gene3D - 51 186 IPR036871 GO:0035091
Trre5g05174 726 Coils Coil 506 533 - -
Trre5g05174 726 SUPERFAMILY PX domain 40 160 IPR036871 GO:0035091
Trre5g05174 726 Pfam PX domain 86 158 IPR001683 GO:0035091
Trre5g05174 726 SMART PX_2 43 160 IPR001683 GO:0035091
Trre5g05174 726 Coils Coil 429 456 - -
Trre5g05174 726 Coils Coil 636 663 - -
Trre5g05174 726 FunFam Phox (PX) domain-containing protein 46 182 - -
Trre5g05174 726 MobiDBLite consensus disorder prediction 167 242 - -
Trre5g05174 726 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 716 IPR044588 GO:0015031
Trre5g05174 726 Coils Coil 538 565 - -
Trre5g05174 726 ProSiteProfiles PX domain profile. 47 164 IPR001683 GO:0035091
Trre5g05174 726 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05174 Trre-Chr5 52960261 52966265 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05174 - - gmx:100789039 1130.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05174 5 52960261 52966265 Trre5g05174 5 52960261 52966265 ECH