Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05158 ATGGCTTTCTCCACCAAATCACTTCTTCTTTTTCTTTTCATTCAATTTTGCTTCTCACTTTTCTCCTCATCATTCGCTCAATCGCCTACCCCTGGGTCTTCTGATGGTTACACTATTTATGGCCGAGTCAAGATCCCTAGTTATGGAACCAAAGAATTCAGCCTTCCAGCGAAAGTTTCAAATGTCAAAGTGATACTTAATGGTGGTCAAAGAGTTTCTTTTCTGAGGCCTGATGGATATTTCTCATTCCACAATGTGCCTGCAGGGACTCATTTAATTGAAGTGGCTGCAATAGGCTATTTCTTTTCACCAGTACGAGTTGATGTTAGTGCCAGAAACCCTGGCAAAATTCAGGCAGCTTTGACTGAAAATAGGAGGGGGCTCAGTGAGTTTGTCTTAGAGCCATTAAAGGAGGAACAATATTATGAGATTAGGGAGCCGTTCTCTATTATGTCCATTGTGAAGAGTCCAATGGGTCTGATGATGGGATTTATGCTGATTGTTGTCTTCCTTATGCCAAAATTGATGGAGAACATGGATCCAGAAGAAATGAAACGCGCTCAAGAAGAAATGAGAAATCAAGGAGTTCCATCTTTAGCAAGCTTGTTACCCGGTGCTGCAAGAAACTAG 630 0.4159 MAFSTKSLLLFLFIQFCFSLFSSSFAQSPTPGSSDGYTIYGRVKIPSYGTKEFSLPAKVSNVKVILNGGQRVSFLRPDGYFSFHNVPAGTHLIEVAAIGYFFSPVRVDVSARNPGKIQAALTENRRGLSEFVLEPLKEEQYYEIREPFSIMSIVKSPMGLMMGFMLIVVFLMPKLMENMDPEEMKRAQEEMRNQGVPSLASLLPGAARN 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05158 209 PANTHER UNCHARACTERIZED 8 207 IPR039163 -
Trre5g05158 209 SUPERFAMILY Starch-binding domain-like 33 114 IPR013784 GO:0030246
Trre5g05158 209 Pfam ER membrane protein complex subunit 7, beta-sandwich domain 58 161 IPR019008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05158 Trre-Chr5 52853296 52855618 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05158 K23568 - gmx:100816780 362.844