Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05139 ATGTACAAGGTAGCAAAAGCATCAGAATACCTTGCCATAACCGGAGCCGGTATCAGAGACATCAAGCTTAAAAAGAAAGCATGGATTTTCCCCGGCCAATCATGCACCCGCTTCGACTTTTCTCCGGTAAACTATACCTTCAATGTTCAAGCAATGAGCGCTGAGAAACTCCCCTTTGTTCTCCCCGCTGTCTTCACTATTGGTCCACGAGAGGACGATCACGGAAGCCTTCTGAAATATGCCAAACTCATCTCAGCACACGATAAAGAATCCAATCACGTCAATGAACTCGTTCAAGGAATCATTGAAGGCGAGACACGTGTCCTCGCTGCATCCATGACTATGGAAGAGGTTTTTAAAGGAACTAAAGAGTTTAAACAAGAAGTATTCGAGAAAGTTCAACTCGAATTAAACCAATTTGGTTTATTGATTTACAATGCGAATGTTAAGCAATTGGTGGATGTGCCTGGTCATGAGTATTTCTCATATTTGGGTCAAAAGACGCAGATGGAAGCCGCGAATCAAGCTAGGGTTGACGTGTCGGAAGCTAAGATGAAAGGTGAGATTGGTTCAAAGTTGAGGGAAGGACAAACACAGCAAAACGCGGCAAAAATTGATGCAGAGACGAAAGTTATTGCGATGCAGAGGGCTGGAGAGAGTGATAAGGAAGGAATTAAAGTGAAGACTGAAGTCAAAGTTTTTGAGAATAAGAGAGAGGCTGAGGTGGCTGAGGCTAATTCTGAATTGGCTAGGAAGAAAGCGGCTTGGACAAAGGCGGCTCAAGTGGCTGAAGTTGAGGCTGCTAAAGCCGTGGCTCTTAGGGAAGCCGAATTGCAAGGTGAGGTTGAGAGAATGAATGCTTTGACTACTACTGAGAAGCTCAAAGCTGAGTTTCTTAGCAAAGCTAGTGTTGAATATGAAACCAAGGTACAAGAGGCAAATTGGGCGCTGTACAAGAAACAGAAAGAGGCAGAAGCAGCTCTGTTTGAGAAGAAGGCAGAGGCAGAAGCACAAATAGCATTGGCAGATGCAACATTTTACGCTCGCAAGCAAGCAGCTGAAGCAGACCTATATGCTAAGAAAAAGGAAGCAGAGGGGATTGTGACAGTTGGGAATGCTCAAGGAGTGTATGTAAGTACACTTTTCAATGCACTTGGAGGAAACTACTATGCTTTAAGAGACTATTTGATGATAAATGGTGGCATGTATCAAGAAATTGCCAAGATTAACGCTGAAGCGATACGTGGACTTGAGCCTAAGATTAGTATTTGGAGTAATGGTGGTGATAGTGGTGGTGATGCCAATGCCATGGGGGGTATGAAAGAAGTTGCTGGTGTGTACAAGATGTTGCCACCTCTGTTTAAGACTGTCCATGAACAAACTGGAATGTTGCCTCCTTCTTGGATGGGAACCTTATCTGACAAAAGCTCTTAA 1434 0.4393 MYKVAKASEYLAITGAGIRDIKLKKKAWIFPGQSCTRFDFSPVNYTFNVQAMSAEKLPFVLPAVFTIGPREDDHGSLLKYAKLISAHDKESNHVNELVQGIIEGETRVLAASMTMEEVFKGTKEFKQEVFEKVQLELNQFGLLIYNANVKQLVDVPGHEYFSYLGQKTQMEAANQARVDVSEAKMKGEIGSKLREGQTQQNAAKIDAETKVIAMQRAGESDKEGIKVKTEVKVFENKREAEVAEANSELARKKAAWTKAAQVAEVEAAKAVALREAELQGEVERMNALTTTEKLKAEFLSKASVEYETKVQEANWALYKKQKEAEAALFEKKAEAEAQIALADATFYARKQAAEADLYAKKKEAEGIVTVGNAQGVYVSTLFNALGGNYYALRDYLMINGGMYQEIAKINAEAIRGLEPKISIWSNGGDSGGDANAMGGMKEVAGVYKMLPPLFKTVHEQTGMLPPSWMGTLSDKSS 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05139 477 Gene3D Band 7 domain 40 155 IPR036013 -
Trre5g05139 477 PANTHER FLOTILLIN-RELATED 1 473 IPR027705 -
Trre5g05139 477 SUPERFAMILY Band 7/SPFH domain 33 172 IPR036013 -
Trre5g05139 477 Coils Coil 318 338 - -
Trre5g05139 477 Pfam SPFH domain / Band 7 family 27 183 IPR001107 -
Trre5g05139 477 CDD SPFH_flotillin 28 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05139 Trre-Chr5 52766889 52768536 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05139 K07192 - aew:130787462 730.709