Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05106 ATGGTTCGAGGAAGTGAAGTTGATGCTGAAAGCGGTGGAGTACCTGAATCAGTTATGGATTCAGTCAACACCACACTCTCAAACCTTCATGAATTGCGTTCAAATTTTGAACAGTTTTTACCACTCATAAACCCTAAAATCCTCTCCCAAATTCCACCTCTTCAACGTGCTCAATCTCTCTTCCTTCTCTCCAAAATCACTTCCACTCTCCTCACATTGAAATTAAGGTGTAATGGGGTTCAACCAAATGATCACCCTGTCAAATCAGAGCTTGATAGATTGGACTTATACCAAGACAAACTTGAACGTTTGTTAGATTTGAATAAAGCTCCACTGCGACCATCTACTACCTTGAATCATCAAGCAGCTACTCGATTTATCGAACACTCTCTGCCTGATCTCACTTCAGAGCAAAGGCAACAAATGAGGAACATAAGTAGAGGGGAGGGACAGAAGAGGAGACATCAGGAGCGGGCTGGTAAAAAGAGGAAGATTCAATCTTCTGAAAGGCCATCTGTTCAAGCTATTGCAAAGGAGTTTTTGGAGAAAGCACAAAGGGAACTTCTAGGTGGTAATAATGGTGGTATTAGGGGACCACTTCAAATTGACAACATGTCAGAAGGTGATGACGATGAAATAAACAACATTTCAGAAGACGACTAA 663 0.4148 MVRGSEVDAESGGVPESVMDSVNTTLSNLHELRSNFEQFLPLINPKILSQIPPLQRAQSLFLLSKITSTLLTLKLRCNGVQPNDHPVKSELDRLDLYQDKLERLLDLNKAPLRPSTTLNHQAATRFIEHSLPDLTSEQRQQMRNISRGEGQKRRHQERAGKKRKIQSSERPSVQAIAKEFLEKAQRELLGGNNGGIRGPLQIDNMSEGDDDEINNISEDD 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05106 220 Coils Coil 87 107 - -
Trre5g05106 220 MobiDBLite consensus disorder prediction 129 220 - -
Trre5g05106 220 MobiDBLite consensus disorder prediction 205 220 - -
Trre5g05106 220 MobiDBLite consensus disorder prediction 131 145 - -
Trre5g05106 220 PANTHER SUN-COR STEROID HORMONE RECEPTOR CO-REPRESSOR 9 200 IPR011082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05106 Trre-Chr5 52367814 52369142 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05106 K12592 - gmx:100795174 284.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05106 5 52367814 52369142 Trre5g05106 5 52367814 52369142 ECH