Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05101 ATGGCGTTGATCAATCCATTTCTTCTACCTACCAAAACCCATCTTGCTTTGCATGTTTCATCACCTCCACCATCCAAAAAAGTACTTCTTTGGACTAACCCATCTTCCAGTTTCATTTTCAACAAAGGCTTGTCATCGTCAAGAAGAAGTAAGCAACCAGGGTGTGTCGCCGCCGCGGCGGATATCAAAGCTGCATCAACTTTACTTGATGGGGAAGAAGATCAGAAAGTTCTAGTGGGACCTTCCAGTGAACAAGAACGCAGAGGTGAAAGAGAGGTTGTAGCCTATGGTTGGACAGAGGAATGGTACCCTTTGTACCTCACTAAAAATGTACCACATGATGCACCATTGGGTCTCAAAGTGTTTGATAAGAACCTTGTTTTGTTTAGAGATGGTAATGATCAGTTTCAATGCTATGAAGATCGATGCCCTCACAGGTTAGCAAAACTATCTGAAGGCCAGTTGATTGATGGAAGGCTTGAATGCCTATATCATGGATGGCAATTCGAAGGCGCGGGAAAATGTGTAAAGATACCTCAGCTTCCTGCGGATGCCAAAATTCCCAAGTCAGCCTGTGTTAAAACATATGAGGTGAGGGACTCTCAGGGTGTTATTTGGGTATGGATGTCTCAAAAGACACCTCCAAATGTCAGTAGATTACCTTGGTTTGAGAACTTTGCAAGGCCAGGGTTTCAAGATATTTCAACAACTCATGAACTCCCATATGATCATTCCATTCTACTGGAAAACTTGATGGATCCTGCTCATGTTCCAATCTCGCACGACAGAACAGATTTTACTGCAAAAAGAGAAGATGCACAGGCACTATGTTTTGAGGTGACTGAACGAACTGATAGAGGTTTTGCAGGTTGGTGGGGAAGAGAGAAAGAGGGTTCTAAGCCTAACTTCTTACGATTTGAGGCTCCTTGTGTTCTACAAAATAACAGGGAAATTGTTGATAAAGATGGTGAAATAAACTACTTCAGTGGTTTGTTTCTTTGTAGACCAACTGGGCAAGGGAAATCCATGCTGATAGTGAGGTTTGGAGCAACAAAAAGATCTCCAATAGTAAAACTGTTTCCTCAATGGTACCTCCATCAGAATGCAAGCAAGGTTTTTGAACAAGACATGGGATTCTTATCATCCCAAAATGAAATTCTTTTGAAAGAGAAGGTTCCAACAAAGGAACTATACCTGAATTTAAAATCATCAGACACGTGGGTTGCTGAATACCGGAAGTGGATGGATAAAGTGGGACACGGGATGCCATATCATTTTGGTCACCGCACTATTTCATTGCCCGAAGAGCCTGCTGTGGTTGAACATGCACCTGCTGGACTTGTCGCAGGATTATCAGCTTCCTCACCAGCAAAGGGGGGTATTGGAGCAATGCATGCCCCAAATTTAGCAAATAGATATTTTAGGCATGTAATACATTGCAAAGCATGTAGTGCCGCCGTCAAAGCTTTTCAAACTTGGAAAAATGTCCTTTCAGCTGTGGCTGTTACATTAGCTGCATTGGCAATTCTGGTATCTGGGAGACAATGGAAAGCCATCCTGTTGGCATCTGCAGCCCTGTGCTCTGCTGGAGTATATGCTTGTTCAACAGCTATTGGATTGAATACAACAAACTTTATTAGGACACATAGGAGATTGTGA 1659 0.4274 MALINPFLLPTKTHLALHVSSPPPSKKVLLWTNPSSSFIFNKGLSSSRRSKQPGCVAAAADIKAASTLLDGEEDQKVLVGPSSEQERRGEREVVAYGWTEEWYPLYLTKNVPHDAPLGLKVFDKNLVLFRDGNDQFQCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGAGKCVKIPQLPADAKIPKSACVKTYEVRDSQGVIWVWMSQKTPPNVSRLPWFENFARPGFQDISTTHELPYDHSILLENLMDPAHVPISHDRTDFTAKREDAQALCFEVTERTDRGFAGWWGREKEGSKPNFLRFEAPCVLQNNREIVDKDGEINYFSGLFLCRPTGQGKSMLIVRFGATKRSPIVKLFPQWYLHQNASKVFEQDMGFLSSQNEILLKEKVPTKELYLNLKSSDTWVAEYRKWMDKVGHGMPYHFGHRTISLPEEPAVVEHAPAGLVAGLSASSPAKGGIGAMHAPNLANRYFRHVIHCKACSAAVKAFQTWKNVLSAVAVTLAALAILVSGRQWKAILLASAALCSAGVYACSTAIGLNTTNFIRTHRRL 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05101 552 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 36 500 - -
Trre5g05101 552 SUPERFAMILY ISP domain 96 216 IPR036922 GO:0051537
Trre5g05101 552 SUPERFAMILY Bet v1-like 202 421 - -
Trre5g05101 552 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 102 207 IPR017941 GO:0051537
Trre5g05101 552 Gene3D - 229 420 - -
Trre5g05101 552 Pfam Pheophorbide a oxygenase 306 391 IPR013626 GO:0010277
Trre5g05101 552 Pfam Rieske [2Fe-2S] domain 101 183 IPR017941 GO:0051537
Trre5g05101 552 Gene3D - 97 225 IPR036922 GO:0051537
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05101 Trre-Chr5 52327150 52329642 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05101 - - gmx:100818625 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05101 5 52327150 52329642 Trre5g05101 5 52327150 52329642 ECH