Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05061 ATGATTCCATCGTTTGTTAGTTTCGCCGGCTTATACAACGGCTATCTCCGCCGTTGTTTCACCGGAGCAGGACTTTTCTCACAAAAAATCGACATAGACAACGAAACATCTCTCCATTTTTGGGGACCAACAAATCAATCAACACAAAAACCTTCACTCCTTCTAATCCATGGATTCGGTCCTATGGCTATGTGGCAATGGCGTCAACAAGTTCAATTCCTCGCTCCACATTTCAATCTATACGTTCCCGATCTAATCTTCTTCGGCGAATCAACAACAAAATCCAAGGAACGAACCGAGATATTTCAAGCAGAATCAGTTGGAAAATTGTTGGAGAAGATAGGTGTGAGAAAGTGCCACGTGGCGGGAACCAGTTATGGTGGTATTGTTGCGTATAATTTAGCGAAAATGTTGGGAGAAGAGAAAATAGAGAAAGTGGTTATTGCTAGTTCTGGTGTGAATATGACAAAGAATCATAACGTGGCGTTGTTGAAAAGAGCTGGAATAGATAAAATTGAAGATCTTATGTTGCCTTCTACTACTCAACATTTGAGGAAATTGATGACACTTTGTGTCGCTAGAAGAATCCCTTTCCTGCCTAATTTTTTCTTGAAGGACTTCTTAAATAGATTATACTCAGATAATAGGAAGGAAAAGATGGAGCTCCTAAGTGGCTTGTCCCTCGGAAGGGTTGGTACTTCAAACATTTCACCTCTTCAACAGGAAGTTCTCATAGTATGGGGAGAAGATGACCAAATATTTCCAGTGCAGATGGCCCATGAATTGAAAGAGGTAATCAGTAAGAAGGTAAAGCTAGAACTGATAAAGGAGGCATCACATGTTCCTCAAATTGAAAAGCCTGAGGAATTCAACAATATTATCCTAAAATTCTTACGCTCCAGCTCTTGA 909 0.4026 MIPSFVSFAGLYNGYLRRCFTGAGLFSQKIDIDNETSLHFWGPTNQSTQKPSLLLIHGFGPMAMWQWRQQVQFLAPHFNLYVPDLIFFGESTTKSKERTEIFQAESVGKLLEKIGVRKCHVAGTSYGGIVAYNLAKMLGEEKIEKVVIASSGVNMTKNHNVALLKRAGIDKIEDLMLPSTTQHLRKLMTLCVARRIPFLPNFFLKDFLNRLYSDNRKEKMELLSGLSLGRVGTSNISPLQQEVLIVWGEDDQIFPVQMAHELKEVISKKVKLELIKEASHVPQIEKPEEFNNIILKFLRSSS 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05061 302 PANTHER SI:DKEY-122A22.2 11 300 - -
Trre5g05061 302 Gene3D alpha/beta hydrolase 19 301 IPR029058 -
Trre5g05061 302 PRINTS Alpha/beta hydrolase fold signature 77 92 IPR000073 -
Trre5g05061 302 PRINTS Alpha/beta hydrolase fold signature 121 134 IPR000073 -
Trre5g05061 302 PRINTS Alpha/beta hydrolase fold signature 243 257 IPR000073 -
Trre5g05061 302 Pfam Alpha/beta hydrolase family 53 291 IPR000073 -
Trre5g05061 302 SUPERFAMILY alpha/beta-Hydrolases 30 299 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05061 Trre-Chr5 52011317 52013195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05061 239 298 Acyl Lipid Metabolism Gene Families AT3G10840 45.000 8.66e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05061 - - lja:Lj1g3v1788330.1 454.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05061 5 52011317 52013195 Trre5g05061 5 52011317 52013195 ECH