Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05055 ATGGCTATGAATGGTAGCGACTCCTCCACCGACACAGAAACCAAGAACAACATCTCTTTTCACTTGGGAAATGCTCAATCACCATTTGTAGTCGCACTCCCATTTCTCAAACTCCCCACCATCTCCAATTTCTCTTCACCCCAACTTCCCACATCTATTTCCAACGCCATTGATCATTTTTCCACACTTCTCCAATCCCTCGCTTCTCAAAACCCCATCATTAACAAATTGCTCTCTCTTTCTTCTCAATTCCATAACACATGCTACCAGATTAGGTGCAGTAACTACAGGAACAGGAGTTTGGTGAATAATTATCACAATTTTGCTGCTGTTTTACCGGGTGATTCCGTGGCTGGATTAGTGGTGGCTAATGGACTTTCAAATTTCTTGAACCTTTACAATACTTTGCTCGTTTGCAGGCTTGTTCTTACTTGGTTTCCTAATGCTCCTCAAGCTATCGTTTCTCCCCTCAGCACCGTGTGTGACCCGTATCTGAACGTATTCCGTGGACTTATCCCCCCTCTTGGAGGACTGGATCTCTCTCCCATCCTAGCATTTCTTGTCCTGAATGCCTTTACTAGCACTGCTGCTGCACTCCCTGCTGAGCTTCCAATCACAGAACAATCAAAACAAGGTCTTGAAGCAAGTTTACAGTCTACTGATGTTACTTCTTCACAGAACAAATGGATGAGACGGCTTCAAGGGACCGGGTCAAAGACCTCCACTCCTGCAAATTAG 738 0.4485 MAMNGSDSSTDTETKNNISFHLGNAQSPFVVALPFLKLPTISNFSSPQLPTSISNAIDHFSTLLQSLASQNPIINKLLSLSSQFHNTCYQIRCSNYRNRSLVNNYHNFAAVLPGDSVAGLVVANGLSNFLNLYNTLLVCRLVLTWFPNAPQAIVSPLSTVCDPYLNVFRGLIPPLGGLDLSPILAFLVLNAFTSTAAALPAELPITEQSKQGLEASLQSTDVTSSQNKWMRRLQGTGSKTSTPAN 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05055 245 PANTHER YLMG HOMOLOG PROTEIN 2, CHLOROPLASTIC 42 203 IPR003425 GO:0016020
Trre5g05055 245 Pfam YGGT family 129 191 IPR003425 GO:0016020
Trre5g05055 245 MobiDBLite consensus disorder prediction 212 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05055 Trre-Chr5 51945120 51949645 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05055 K02221 - gmx:100802756 289.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05055 5 51945120 51949645 Trre5g05055 5 51945120 51949645 ECH