Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05045 ATGGCTTCTGCTTCTTGTGCAACAGTTTTGCCACTGTGTTCTGGTACCCAAAATAAGCTGAAAAATCCATCCTCCGAATCCTTTTTCCGGCCATTACCAGTAACACAACCAAAGAGGATCACAAAGTCAAAATCCAAGCTTGAAATTAATGCATCTTTGAAAGAGAAAACAGTAGCAGGACTTACAGCTGCATCCTTGACAGCTTCCATGGTTATACCTGAGGTGGCTCATGCAGCTGGATCTGATCTCTCACCATCTCTCCAGAACTTTCTACTAAGTATTTTTGCTGGTGGAGCTGTGCTAGCAGCTATATTTGGAGCTGTTATTGGGGTTTCGAACTTTGATCCGGTTAAAAGAGCTTAA 363 0.427 MASASCATVLPLCSGTQNKLKNPSSESFFRPLPVTQPKRITKSKSKLEINASLKEKTVAGLTAASLTASMVIPEVAHAAGSDLSPSLQNFLLSIFAGGAVLAAIFGAVIGVSNFDPVKRA 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05045 120 PANTHER OS07G0673550 PROTEIN 1 119 - -
Trre5g05045 120 Gene3D Single helix bin 83 120 - -
Trre5g05045 120 Pfam Photosystem II reaction centre X protein (PsbX) 84 119 IPR009518 GO:0009523|GO:0015979|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05045 Trre-Chr5 51910101 51910463 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05045 - - gmx:100305487 159.458
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05045 5 51910101 51910463 Trre5g05045 5 51910101 51910463 ECH