Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05027 ATGGAAGAAATAATGCAGCTACCATACAACACGACGGTGAAGCTCATGCTTGGTTCATTAGAACGCAATCTTCTCCCTGATGCTGTCATTAGGAGACTCACGCGCCTTCTTTTGGCCACTCGCCTACGCTCTTCTTACAAGTCTTCTTCTGAACTTCAGCTTTCTGATCTTCTCCAATTTGCACATTCTTTACAAGAGATGCCTATTGCTGTTAATACTGATATTCCTAAATCTCAACATTATGAATTACCAACCTCTTTTTTTAAGCTGGTTCTTGGAAAGAATCTCAAATACAGTTCTTGTTATTTCTCTTCTGCCTCAAAGACATTGGAAGATGCTGAAGAAGAAATGTTGAAACTTTATTGTGAGAGATCAAACCTGAAAGATGGTCACACTGTTCTTGATGTCGGATGCGGTTGGGGATCACTCACTTTATACATTGCTAAGAATTACAGTAATTCCAGGGTTACAGGAATCTGCAATTCCACCACTCAAAAAGCTTTTATCGAGGAGAAATGCCTGGAGCTGCAGCTGGAAAATGTGGATATCATTGTTGCAGACATTAGCACATTTGAAATGGAAGCTTCTTATGACAGAATATTTTCTATAGAAATGTTTGAGCATATGAAGAACTATAAAGAGCTTCTCAAGAAGATATCCAAATGGATGAAAGAGGATGGTCTTTTATTTGTTCATTACTTCTGCCACAAAACATTTGCCTACCACTTTGAGGACAAAAATGAAGATGATTGGATTACGAGATACTTCTTTACCGGAGGAACTATGCCTGCAGCAACTCTACTTCTCTATTTCCAAGATGATGTTACTGTCATCAACCATTGGCTGGTAAATGGGAAACACTATGCACAGACCAGCGAAGAGTGGCTCAAAAGAATGGATAAGAACATGAAATCCATCAAGCCAATTATGGAATCAACATATGGCAAAGATTCAGCTACTAAATGGACTGTTTATTGGAGAACATTTTTCATAGCTGTAGCAGAACTCTTTGGATACAATAATGGCGAAGAATGGATGGTTGCACACTTTCTTTTCAAAAAGAAATAA 1068 0.383 MEEIMQLPYNTTVKLMLGSLERNLLPDAVIRRLTRLLLATRLRSSYKSSSELQLSDLLQFAHSLQEMPIAVNTDIPKSQHYELPTSFFKLVLGKNLKYSSCYFSSASKTLEDAEEEMLKLYCERSNLKDGHTVLDVGCGWGSLTLYIAKNYSNSRVTGICNSTTQKAFIEEKCLELQLENVDIIVADISTFEMEASYDRIFSIEMFEHMKNYKELLKKISKWMKEDGLLFVHYFCHKTFAYHFEDKNEDDWITRYFFTGGTMPAATLLLYFQDDVTVINHWLVNGKHYAQTSEEWLKRMDKNMKSIKPIMESTYGKDSATKWTVYWRTFFIAVAELFGYNNGEEWMVAHFLFKKK 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05027 355 Pfam Mycolic acid cyclopropane synthetase 78 326 - -
Trre5g05027 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 78 350 IPR029063 -
Trre5g05027 355 PIRSF CmaB 14 354 IPR003333 GO:0008610
Trre5g05027 355 CDD AdoMet_MTases 132 234 - -
Trre5g05027 355 Coils Coil 110 130 - -
Trre5g05027 355 FunFam Cation-transporting ATPase 69 349 - -
Trre5g05027 355 Gene3D Vaccinia Virus protein VP39 73 349 IPR029063 -
Trre5g05027 355 PANTHER - 1 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05027 Trre-Chr5 51807135 51809491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05027 78 306 Acyl Lipid Metabolism Gene Families AT3G23510 28.205 1.49e-21 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05027 - - gmx:100818389 627.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05027 5 51807135 51809491 Trre5g05027 5 51807135 51809491 ECH