Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05018 ATGGAGGATTTTCAAAGATCAAAATCTTATGCAAATGGCCAAATGATGCAGATAGAAAGTTACTATGGAGGACCACCTAAACCTTATGATCTTAGAAGCTATAGTTCTTCTTATGTTCAACAAGCTCCTAAGGATTTGAAGTTGAAGAAAGGTAAAAGTTTTTCAGCTGGTTCTTCTTTTTCAAAGACTTTGAGTTTTGCTGATCCTGAACTTCAGAGGAAGAAGAGGGTTGCTAGCTATAAAATGTATTCTGTTGAAGGTAAAGTCAAAGGTTCTTTCAGAAAGAGTTTTAGATGGCTTAAGAATAAGTACTCACAAGTTGTTTATGGTTGGTAG 336 0.3512 MEDFQRSKSYANGQMMQIESYYGGPPKPYDLRSYSSSYVQQAPKDLKLKKGKSFSAGSSFSKTLSFADPELQRKKRVASYKMYSVEGKVKGSFRKSFRWLKNKYSQVVYGW 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05018 111 Pfam Domain of unknown function (DUF3511) 66 110 IPR021899 -
Trre5g05018 111 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED 1 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05018 Trre-Chr5 51732144 51732479 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05018 - - gmx:100527044 171.014
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05018 5 51732144 51732479 Trre5g05018 5 51732144 51732479 ECH
Trre1g00535 1 3965071 3965421 Trre5g05018 5 51732144 51732479 PCT