Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05012 ATGATGAGTACTAACTTAAACTCACCTTCCTCTTCTTCTTCCTCCTCATCATCCTTATCAATGGATCTAGACGAATCCACTGAAACTCGAATCCAACGCCTAATATCCGAACACCCTGTTATCATCTTCACCCGATCCTCCTGCTGCATGTGCCACGTCATGAAGAATCTCCTCTCCACCATAGGCGTTCATCCCACAGTTATCCAATTGGACGACAACGAGATCCTCTCTCTCCCCACCTCCGATCATACTCTCGCACCTGCCGCTTTCATCGGCGGCATCTTTATCGGCGGATTGGAATCCCTCGTCGCTCTTCACGTCACCGGCCACCTCGTTCCCAAACTCGTTCAAGTCGGTGCTCTCTGGAATATTTGA 375 0.4987 MMSTNLNSPSSSSSSSSSLSMDLDESTETRIQRLISEHPVIIFTRSSCCMCHVMKNLLSTIGVHPTVIQLDDNEILSLPTSDHTLAPAAFIGGIFIGGLESLVALHVTGHLVPKLVQVGALWNI 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05012 124 Pfam Glutaredoxin 40 75 IPR002109 -
Trre5g05012 124 CDD GRX_GRXh_1_2_like 39 114 - -
Trre5g05012 124 NCBIfam glutaredoxin-like family 31 122 IPR011905 -
Trre5g05012 124 PANTHER GLUTAREDOXIN 30 122 IPR011905 -
Trre5g05012 124 SUPERFAMILY Thioredoxin-like 27 122 IPR036249 -
Trre5g05012 124 ProSiteProfiles Glutaredoxin domain profile. 28 122 - -
Trre5g05012 124 Gene3D Glutaredoxin 21 122 - -
Trre5g05012 124 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05012 Trre-Chr5 51681331 51681705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05012 31 122 Miscellaneous Gene Families AT4G15700 42.000 2.27e-22 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05012 - K03676 gmx:100791969 169.474