Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04994 ATGTCCCGCTTTACCTTCTTCCTCCTCCTCATCGCCACCATTATCCCCATCTTCTCCGCTGATCATCACATCACCGACGATTATCTCCGATTACCCTCCGAAGCTTCCAAATTCTTCCAGTCACCTTCTTCCGATGACGATAGCAATCAAGGCACCAGGTGGGCTATCTTAATTGCCGGTTCCAATGGCTACTGGAATTATAGACATCAGTCTGATGTTTGTCACGCATATCAAGTGCTAAGGAAAGGTGGTCTGAAAGAAGAGAATATTGTTGTTTTTATGTATGATGACATTGCTTTCAACGAAGAGAATCCACGCCCCGGAGTCATCATTAACAGTCCACATGGAAATGATGTTTACAAGGGAGTCCCTAAGGATTATACTGGTGAAGATGTTACTGTTAACAACTTCTTTGCTGCTTTACTTGGAAATAAGTCGGCTCTTACTGGTGGCAGTGGGAAGGTTGTGGACAGTGGTCCCAATGATCATATATTTGTATACTACAGTGATCATGGGGGTCCTGGAGTGCTTGGGATGCCTACTAGTCCGTACATGTACGCATCTGATCTAATTGAAGTCTTGAAGAAGAAGCATGCTGCTGGAACTTATAAAAGCCTAGTATTTTATCTAGAAGCATGCGAATCTGGGAGTATCTTCGAGGGTCTTCTTCCAGAAGGTCTAAATATCTATGCAACTACTGCTGCAAATGCAGAAGAAAGCAGTTGGGGAACATATTGTCCTGGCGAGAATCCTAGTCCTCCCCCTGAATATGAAACCTGCTTGGGTGACCTATACAGTGTTGCTTGGATGGAAGACAGTGACATACACAATTTGCAAACAGAAACTCTGCACCAGCAATATGAATTGGTCAAAGAAAGGACTGCAAACGGAAATACAATCTATGGCTCCCACGTGATGCAGTATGGTGACATTGGGGTTAGCAAGGATAATCTATTCTTATATTTGGGATCAAATCCTGCTAATGAAAATTTCACTTTTATGGGTAGAAACTCATTAGTGCCACCTTCAAAAGCGGTCAACCAGCGTGATGCAGATCTCGTCCATTTCTGGGATAAGTTCCGCAAAGCTCCTCAGGGTTCTCCTAGGAAAGTTGCAGCTCAGAAGCAAGTTCTGCAAGCCATGTCTCACAGAATGCATATAGACGACAGCGTAAAACTTGTTGGAAAACTCCTATTTGGCATGAAAAAGGGTCCAGAGGTGCTCACCAGTGTTAGACCAGCTGGGCAACCACTTGTTGATGACTGGGACTGCCTCAAAACACTGGTTAGGACTTTTGAGACATATTGTGGCTCTCTGTCTCAGTATGGGATGAAACACATGAGATCCTTTGCAAATTTCTGCAACGCAGGAATACACAGAGAGCAAATGGCTGAGGCCTCTGCACAAGCATGCACCAATATTCCAGCAAATCCCTGGAGCTCTCTGCAAAGTGGTTTCAGCGCCTAA 1467 0.4451 MSRFTFFLLLIATIIPIFSADHHITDDYLRLPSEASKFFQSPSSDDDSNQGTRWAILIAGSNGYWNYRHQSDVCHAYQVLRKGGLKEENIVVFMYDDIAFNEENPRPGVIINSPHGNDVYKGVPKDYTGEDVTVNNFFAALLGNKSALTGGSGKVVDSGPNDHIFVYYSDHGGPGVLGMPTSPYMYASDLIEVLKKKHAAGTYKSLVFYLEACESGSIFEGLLPEGLNIYATTAANAEESSWGTYCPGENPSPPPEYETCLGDLYSVAWMEDSDIHNLQTETLHQQYELVKERTANGNTIYGSHVMQYGDIGVSKDNLFLYLGSNPANENFTFMGRNSLVPPSKAVNQRDADLVHFWDKFRKAPQGSPRKVAAQKQVLQAMSHRMHIDDSVKLVGKLLFGMKKGPEVLTSVRPAGQPLVDDWDCLKTLVRTFETYCGSLSQYGMKHMRSFANFCNAGIHREQMAEASAQACTNIPANPWSSLQSGFSA 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04994 488 FunFam Vacuolar-processing enzyme beta-isozyme 348 476 - -
Trre5g04994 488 Pfam Peptidase C13 family 53 322 IPR001096 GO:0006508|GO:0008233
Trre5g04994 488 Gene3D - 51 347 - -
Trre5g04994 488 FunFam Vacuolar-processing enzyme beta-isozyme 51 347 - -
Trre5g04994 488 Gene3D - 348 476 IPR046427 -
Trre5g04994 488 PANTHER HEMOGLOBINASE FAMILY MEMBER 30 473 IPR001096 GO:0006508|GO:0008233
Trre5g04994 488 PIRSF AE 1 488 IPR043577 GO:0004197|GO:0051603
Trre5g04994 488 PIRSF Legumain 1 488 IPR001096 GO:0006508|GO:0008233
Trre5g04994 488 PRINTS Hemoglobinase (C13) cysteine protease signature 79 108 IPR001096 GO:0006508|GO:0008233
Trre5g04994 488 PRINTS Hemoglobinase (C13) cysteine protease signature 154 173 IPR001096 GO:0006508|GO:0008233
Trre5g04994 488 PRINTS Hemoglobinase (C13) cysteine protease signature 203 219 IPR001096 GO:0006508|GO:0008233
Trre5g04994 488 PRINTS Hemoglobinase (C13) cysteine protease signature 54 78 IPR001096 GO:0006508|GO:0008233
Trre5g04994 488 PRINTS Hemoglobinase (C13) cysteine protease signature 126 141 IPR001096 GO:0006508|GO:0008233
Trre5g04994 488 CDD legumain_C 350 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04994 Trre-Chr5 51534346 51539059 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04994 K01369 - gmx:100791675 877.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04994 5 51534346 51539059 Trre5g04994 5 51534346 51539059 ECH