Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04953 ATGGCCTCACTAACACCCAAACCAGAGAAAAAACTTGTAGAATTTCTAAAGGAACAACAAGAACCTTTCATCTTAGACCTTTACTTACTAGAAAAATCAAAATCATGGAGTTCATCAATTAAGAATTTTGAAACACCACCTTCAAATTCTATCATAAACAAAAAGCATAAACCTCTCTTTCCATTCCTTAAACTTTTATTAACAGCTATACATCATGATAAGAAAAAGAAGAAGAAACTTGCAACGATCAAAGACTCCAACACTACAAATTTAAACAAACATGCCAACTTTGTTGATAATATCACTCAAGAAAGTAACAACTGTAGTGATCATCAAACAGTTATGGAAACGGATCGTTTCTCAACCGCTAGCAGTTCCACCATGTTCCAATCATGTTCAGATATCGATGATGAAGAAGAAGATCGAACATCGTTTTCTCTAGACACTACTTGCCAAGCTTGCAGTTTGTGTAACATTGGAGTCCAGAGCCAGCAAGATACAACCAAAAGAAAGCGCCGACAGAGATGTATAGAAGTGTGTGTGTCACATGAAACATTGAATAAGGATGTTTGTGTTTGTTGTGGTGTGATTGTGCCAAAGAAAATCACTGAGGATTCTTTATTATCAGTTGCTTTATTTAGTTCACTTTTTGAAACATCAAAGAAGGATCAGAAGAATTATAGTACTAAACAACTGCAACAGATTCTTGGGCGGAAAAAGGTGTTGCACAAGACAAAGAGATTACTATTTGATTGTGTGAGAGAAGTGACCATAAATCTGAATAGAAAAGATAGTGAAAGATCATCACCTGAAATGTTGGAAAAGATTATATGGGAGAGGACAAAAAAATGGAGTCAAAGGGGTGGAAATATTGAGACAAATTTAACTAATTTGTTGAATTTGGATTACTTGGATTCAATTAATGAATGGAGTGAATTTAAGACAGAGGTGAAAGATGTTAGTTTTGAAATTGCTGATGCAATTTTGGAATGTGTGATTAAGGATGAAATAGTGTTAGAGATGTTTGAAACTTAA 1035 0.342 MASLTPKPEKKLVEFLKEQQEPFILDLYLLEKSKSWSSSIKNFETPPSNSIINKKHKPLFPFLKLLLTAIHHDKKKKKKLATIKDSNTTNLNKHANFVDNITQESNNCSDHQTVMETDRFSTASSSTMFQSCSDIDDEEEDRTSFSLDTTCQACSLCNIGVQSQQDTTKRKRRQRCIEVCVSHETLNKDVCVCCGVIVPKKITEDSLLSVALFSSLFETSKKDQKNYSTKQLQQILGRKKVLHKTKRLLFDCVREVTINLNRKDSERSSPEMLEKIIWERTKKWSQRGGNIETNLTNLLNLDYLDSINEWSEFKTEVKDVSFEIADAILECVIKDEIVLEMFET 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04953 344 PANTHER DUF4378 DOMAIN PROTEIN 1 343 - -
Trre5g04953 344 Pfam Domain of unknown function (DUF4378) 206 334 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04953 Trre-Chr5 51192742 51194100 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04953 - - tpra:123894267 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04953 5 51192742 51194100 Trre5g04953 5 51192742 51194100 ECH
Trre1g00431 1 3174313 3176112 Trre5g04953 5 51192742 51194100 PCT