Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04926 ATGTCGAATCGTTACGCTCAGCCTAAACAAGACCATACCAACAATAAGGGTTTCAACAATACTCAGAAGAAATTCGTCCCTAAAAATCCGACTCCAACCTTATCAACTTCCCTAAGAGATAAACAACAAACTACTTCCGTTACCAATACCAATTCTTCTTCCTCCTCGGGTACCGTTCAACCGGCTAGGGGTGTGAATATCAATGCCAATTTCGTTTATTATTTGCCACAAGATGAAGCAGTTGCTGCTGGTTTTGGTGCTGAGGATGGTGGATTAGATGCTCTTGAATCTCAGAAAGTTGTTGATCTTCTCAATTCACAGTTGTCTCGTTTGCTCAAGTTGAAACCCAAAGATTTTTGGTCACAAGTGGCTAGTGATACCTCCTTGCATGAGTTTCTCAACAGCTTTCTGAAATTTAGGAGTAGATGGTATGATTTACCTCATCGTGGGACTAGAGGGATTGTTGCTGGTGTTATTTTTGGTGAGCATGATTTGAGCCGTCGTGTCTTCATGGTATTGTATAGAATATCTTCCAATCGAGATCCTGGTGCTGGGCCTGCTGATACACTCAGTTTGAGAGATCATGAAGTTCTTTTGCAGGAGAAGAAGTTGCTTGATTTGCCAAAGTTGTTTGATATATGTGCCATATACAATCATGAAAATGAAGAATTGACAAGATTGCTGGTTAGAAAAGCTTTGCATGCTCAGCCTTGGATGCATGATAATCTGACTGCCGTAACATCTCATTTTATGGTCATTGTAAGCACAATGCATGAACGGTGCAGTTCATCATTGGAGGTCTTATTTGCTTCTGGAAGTCTTGATGACCATAATGCTGCTTTTCTAAAATCTGATCTTCTGGAGGTGATGGACTTTATAAATGATGCAATTGTATCAATGGATGCTTTTGTTAGTGCATACGAACCAGCAGCTTTATGGTTCTCTTCCCCTGTTGAGATGAGCTATGGGAACGAAGAACTCCTGAGTTTCCTTGCCAGATTGCATGATTCGCTAATTCCATCCATGCAAAAGGGGTTCCATATCATTTTTGCTGACAAACAAGATGACATGGTCTCTAATATTGTGGTTAGTTTGAAGATGTTAAGAACGAGATTGGTGAAGTTTGGGTGGCAGTTATTGCATTTATGCTATTTAAGTGATGATGTGTTCCTAGATAGCATCCCTCTTCCAGCTGCCACGAAGATGTTTCCTGCTAATGTGGAAGACCCAGTCATCAGAGCAGATATTCTCGTTCAAACATTTAGAGAGATCAATTCAGTATCATTAAGTTTCCTGGAAATCTACAAGAAGGAAACCTTTCTTCAAGATGTTGAAAGGAATTTCAATATATTAAGCAAGATTGAGGGATTAAAACATAATGGGTGGATATTCATCGATGATGAGCAACTTAAATATATATCTGGGATTTTGAGTTCTCCGAAGGAGATTAATAAGGAGCCATATTCTGCAAAGATCCCTGTGCCGAAACAAGCCATGCAGACAGATGAAGATGCTGTAGTTTTAGAGTCAAAAATCAGTCAAATTAGGGACCTGTTTCCTGATTATGGTAAAGGGTTTTTATCTGCATGTCTTGAGGTCTATGACCAGAATCCAGAAGAGGTTATTCAAAGAATTTTAGAAGGAACCCTGCATAAGGATCTGATGTCCTTGGATACTTCTTTAGAAACAGTGCCAAAGTCACTAGCCAAGTCTACCACTGTTAGCAGGAATGATAAAGGAAAAGGTATACTAATTGATTCTACGCCAGTGTCCTCAAATACAAAAGTTTTTAATGGGAAGCAACAGACAGTAGGACCATTGATGCCATCCTCTGCTCTACTTGGAAAATTTGTGAGGAAATCTACAGCCGACACGCCTGATGCAAGTATTTTGGACAATAAGGATGAGAAAGATGCATCGAGAATTTTACAATATGAATATGATGATGAGTATGATGACTCTTTTGATGACTTAGGTCTAAGCGTAGCAGACTCTGGAGTAGAAGGAAATGAAATGCTTGACGACGAAATGAATGAAAAATCAGGGAAATCAAGGGCAACAGGGACTGGAAACTCTGTCCAAAATCCCTCTAATACAAAATGGGGCTCTAGGCAAAAGCCACAGTACTATGTCAAGGATGGTAAAAATTACAGCTACAAAGTGGCAGGTGCAGTGGCAGTTGCAAATTCTAATGAAGCTTCTTTAGTTAATGAAGCTCAGAAAGAGTTGATACATGGTCTTGGACGTGGCGGCAACCTTCCTCTTGGTGCGGTACAGAAGTTGGCAGATTCCTACAAGGGAGGTGGTAACCAATTCCAAGTTTCTGAAACAGAAGGGAGAGGGAGTACCAGTGGCAGGGGAAAAAGAGAAGGGGGAAGACATATTGAACATAATCAGCATCAAGAAAAACAATCTGATGTATCTGAAGTGGAAGGTAGGGATCAGGGTCCAAATAACAGAGGGAGAGGGAGAGGGAGAGGGAGAGGAAGACATATTGAACATAATCAACATCAAGAAAAAGAATCTGATGTTTCTGAAGTGGAAGGTGGAGATCAAGGTCCAAATAGCAGAGGGAGAGGGAGAGGAAGAGGGAGGGGAGGAGGTAGAAACAACCATTACAGGAAGGATCAGGCCACGAAGAAGCATTTCTCTGGATTGAGTGGTTTTTGA 2670 0.4086 MSNRYAQPKQDHTNNKGFNNTQKKFVPKNPTPTLSTSLRDKQQTTSVTNTNSSSSSGTVQPARGVNINANFVYYLPQDEAVAAGFGAEDGGLDALESQKVVDLLNSQLSRLLKLKPKDFWSQVASDTSLHEFLNSFLKFRSRWYDLPHRGTRGIVAGVIFGEHDLSRRVFMVLYRISSNRDPGAGPADTLSLRDHEVLLQEKKLLDLPKLFDICAIYNHENEELTRLLVRKALHAQPWMHDNLTAVTSHFMVIVSTMHERCSSSLEVLFASGSLDDHNAAFLKSDLLEVMDFINDAIVSMDAFVSAYEPAALWFSSPVEMSYGNEELLSFLARLHDSLIPSMQKGFHIIFADKQDDMVSNIVVSLKMLRTRLVKFGWQLLHLCYLSDDVFLDSIPLPAATKMFPANVEDPVIRADILVQTFREINSVSLSFLEIYKKETFLQDVERNFNILSKIEGLKHNGWIFIDDEQLKYISGILSSPKEINKEPYSAKIPVPKQAMQTDEDAVVLESKISQIRDLFPDYGKGFLSACLEVYDQNPEEVIQRILEGTLHKDLMSLDTSLETVPKSLAKSTTVSRNDKGKGILIDSTPVSSNTKVFNGKQQTVGPLMPSSALLGKFVRKSTADTPDASILDNKDEKDASRILQYEYDDEYDDSFDDLGLSVADSGVEGNEMLDDEMNEKSGKSRATGTGNSVQNPSNTKWGSRQKPQYYVKDGKNYSYKVAGAVAVANSNEASLVNEAQKELIHGLGRGGNLPLGAVQKLADSYKGGGNQFQVSETEGRGSTSGRGKREGGRHIEHNQHQEKQSDVSEVEGRDQGPNNRGRGRGRGRGRHIEHNQHQEKESDVSEVEGGDQGPNSRGRGRGRGRGGGRNNHYRKDQATKKHFSGLSGF 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04926 889 MobiDBLite consensus disorder prediction 782 821 - -
Trre5g04926 889 SMART cue_7 507 549 IPR003892 GO:0043130
Trre5g04926 889 CDD CUE_ASCC2 509 548 IPR041800 -
Trre5g04926 889 MobiDBLite consensus disorder prediction 1 61 - -
Trre5g04926 889 MobiDBLite consensus disorder prediction 683 705 - -
Trre5g04926 889 ProSiteProfiles CUE domain profile. 507 550 IPR003892 GO:0043130
Trre5g04926 889 MobiDBLite consensus disorder prediction 832 847 - -
Trre5g04926 889 MobiDBLite consensus disorder prediction 768 889 - -
Trre5g04926 889 Gene3D - 505 550 - -
Trre5g04926 889 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 8 888 - -
Trre5g04926 889 Pfam CUE domain 509 549 IPR003892 GO:0043130
Trre5g04926 889 SUPERFAMILY UBA-like 506 564 IPR009060 GO:0005515
Trre5g04926 889 MobiDBLite consensus disorder prediction 674 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04926 Trre-Chr5 50929700 50936128 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04926 K18667 - gmx:100778129 1199.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04926 5 50929700 50936128 Trre5g04926 5 50929700 50936128 ECH