Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04909 ATGTCTTCACAAATGAAGAAAAAAACATCAACTCACCACAACATTCCCAAAACTCCTTCCAAAAGCAGTCATAATAATACAACAGAAACAAACCACTCTCCACATATTCAACTTTGTAACAGCCCATGTTGTTTCTTCTGCATCATGCAAGAACAAAATCCATCTCTCAGAAAATCAAAAATATCAACATGCTTCAAAGAACTACCTCAAAGAGACAATCAAGAACATGTCTTAGTCCTTAGTGGACTATGGAACATAGCCATGACTCAACCAAACAATCCAGAGTTTCCTTCTCTTGGTATATTCAACTGCATGGCAAATCTAATCACCAAAGGTACCAAAAACAAAACTTGGCTTCACACAAATCAAAACATATATATACCTTATTATGCTGCTCATATTATTGGCTCTTATACTATGAACAAAGAAGAGTTTGCACAAATAGCTGTTAAATCTGGTGTTATACCACCATTGTTAGAGCTTCTGAAAGGTAAAATAAGTTGGGTTGAACAAAGAGTAGCTGTTAGAGCACTTGGTCATTTAGCTAGTTACAAAAGCACTTTTGAATCAGTGGCAGAGTATGAATCAGAGTTAGTGAAGTTAGCAATGAATTTAGCTTCAACTTGCTTAGAAAAAATCTATGTTGAATTTATATCAGTTGATAAAAGAGTTGAGTATCATAGAAACTTGCTTACAAGAGGTTTAGGTGATTTAGAGATGGAGAATCGAAAAGCCGAAGAATGGACTAGTCAACTTCAATGTTGGTCTATTTATCTTCTTAATTGTTTTGCTTGCAAAGATTATAATAATAAATCTTTGAATCTTATTTGCAAAAATGTGTTTTTGAATGATTTATGTGATATGTGGGGTGGATTGATGAATCACACTTCATCTGGTGGGTTTGGACTCATTAGAATCCTTTGTTACAATAACATTGGAAGGAAAAAAATTGCTATGTTACCAAAAGTTGTGAAAACTCTTTGTAACCTCTCAAGATCTTGTGATGATTGGCAATATCTTGGTATAGATTGTCTTTTATTGCTTCTCAAGGATCAAAATATAAGGTACAATGTTGTTTTTGATAATGTTGATGTTGTTTCATGTCTTGTTGATTTGATTGAACTTAGAAGCCTTGGAGATAAATCGAATGTTGGTGACACTATCACAAAGGTGCTAGTGTCACTTCTTGAAGATAATAACAATGATTGTAATTTGAAATTCTCGACGAATATGAATTTGAAGTTGGTTAGGAGGAATAAGGAGAATCTGATGTCAGAGGTAAAATTGGAAGAAAAAATGGTTACTGCGAAGTTGATTAAGCAAGAAGCGAATCGTATGTTTAGTTTGGGAAGAGTAGAAGAAGCTTTATTGAAATATTGTGAAGCACTTGATATTTGTCCATTGAAGTTTAGAAATGAAAGAATGGTGATTTATAGTAACAAAGCTCAATGTAATCTTTTGCTTAAAAAAGTTGATTTAGCTATAAGTGATTCTACACGTGCTCTTTGTCTCTCTAATCCAACAAATTCACATGGTAAAAGTCTTTGGAGAAGATCACAAGCTTATGATATGAAAGGAATGGCAAAAGAGAGTCTTATGGATTGTATTATGTTCATGAATGGTTTTGTTAAGTCAAATGAGAAAAAGAATGTTAAGGTTCCATATCATGTTGCTAGGATGTTCTGCAAACAAATGGATGCCACGTGGCTATTTGGTTCTGTTTGTTCAAAGTCAAAGGTGATACACAACGTTAATGTTCCACTTGTGGAAAACACTTGTGAGATTGAAGGGGATCATGAGATTGAGACTGAGGGTAACTATAAAGATCAACCTTCTAATCTTAAGTCGGTGATGGAAAAGAGTTTCATGTCGGGCTTGTCTACCATTATTGAAGAACCTTTTCATGTTAAAGAAGCTAGTAGAAGAAAGATGGAAAGAGCAAGAAGGAGATTAAAGAAAGCTATTGTAGATTAA 1974 0.3389 MSSQMKKKTSTHHNIPKTPSKSSHNNTTETNHSPHIQLCNSPCCFFCIMQEQNPSLRKSKISTCFKELPQRDNQEHVLVLSGLWNIAMTQPNNPEFPSLGIFNCMANLITKGTKNKTWLHTNQNIYIPYYAAHIIGSYTMNKEEFAQIAVKSGVIPPLLELLKGKISWVEQRVAVRALGHLASYKSTFESVAEYESELVKLAMNLASTCLEKIYVEFISVDKRVEYHRNLLTRGLGDLEMENRKAEEWTSQLQCWSIYLLNCFACKDYNNKSLNLICKNVFLNDLCDMWGGLMNHTSSGGFGLIRILCYNNIGRKKIAMLPKVVKTLCNLSRSCDDWQYLGIDCLLLLLKDQNIRYNVVFDNVDVVSCLVDLIELRSLGDKSNVGDTITKVLVSLLEDNNNDCNLKFSTNMNLKLVRRNKENLMSEVKLEEKMVTAKLIKQEANRMFSLGRVEEALLKYCEALDICPLKFRNERMVIYSNKAQCNLLLKKVDLAISDSTRALCLSNPTNSHGKSLWRRSQAYDMKGMAKESLMDCIMFMNGFVKSNEKKNVKVPYHVARMFCKQMDATWLFGSVCSKSKVIHNVNVPLVENTCEIEGDHEIETEGNYKDQPSNLKSVMEKSFMSGLSTIIEEPFHVKEASRRKMERARRRLKKAIVD 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04909 657 MobiDBLite consensus disorder prediction 1 31 - -
Trre5g04909 657 Gene3D Tetratricopeptide repeat domain 435 540 IPR011990 GO:0005515
Trre5g04909 657 SUPERFAMILY TPR-like 430 535 IPR011990 GO:0005515
Trre5g04909 657 SMART arm_5 142 183 IPR000225 GO:0005515
Trre5g04909 657 Coils Coil 413 433 - -
Trre5g04909 657 Coils Coil 637 657 - -
Trre5g04909 657 Gene3D - 51 434 IPR011989 -
Trre5g04909 657 SUPERFAMILY ARM repeat 74 401 IPR016024 -
Trre5g04909 657 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 37 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04909 Trre-Chr5 50818837 50821435 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04909 - - gmx:100777591 796.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04909 5 50818837 50821435 Trre5g04909 5 50818837 50821435 ECH