Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04885 ATGAAGCGTCCACTTTCATCATCAGCAACGAGTGAAGACAGAAAAATGAAAAGGGTGAAGGAGACAGAAACAGATGAAAAGTTTGAAAAAATTGATGGGGTTTGTGAAAAGAATCGTGGGTTAGCGAGTTTCGATGAAAATATGCTTTTTGAGGTTTTGAAACATGTTGATGCAAAAACATTAGCTATGTCTAGTTGTGTGAACAAACAATGGCACAAAACAGCACAAGATGAGAGACTTTGGGAATTGATCTGTACAAAACAGTGGGCTAACACTGGTTGTGGTGAACAACAGTTACGTTCTGTTGTTCTTGCTCTTGGTGGGTTTCGTCGTCTTCATTCTCTCTATCTTTTACCTCTTTCAAAGCCACAAACATCATCATCAACATCGTGTTCTTCATCTTCTTCATCTTCATGGGGTCCAATACCACAACAAGTGATTAGGTCAAAACCATTACCTCGTTTGGGGAAAGACGAGGTTCATCTTTCTCTTTCACTTCTCTCTATTCGTTATTATGAGAAGATGAATTTCAATAACAGAAACATGTGA 549 0.3843 MKRPLSSSATSEDRKMKRVKETETDEKFEKIDGVCEKNRGLASFDENMLFEVLKHVDAKTLAMSSCVNKQWHKTAQDERLWELICTKQWANTGCGEQQLRSVVLALGGFRRLHSLYLLPLSKPQTSSSTSCSSSSSSSWGPIPQQVIRSKPLPRLGKDEVHLSLSLLSIRYYEKMNFNNRNM 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04885 182 FunFam F-box protein GID2 31 140 - -
Trre5g04885 182 CDD F-box_AtGID2-like 43 85 - -
Trre5g04885 182 PANTHER F-BOX PROTEIN SNE 42 178 IPR044184 GO:0009937|GO:0019005
Trre5g04885 182 MobiDBLite consensus disorder prediction 122 144 - -
Trre5g04885 182 MobiDBLite consensus disorder prediction 1 23 - -
Trre5g04885 182 Pfam F-box domain 48 82 IPR001810 GO:0005515
Trre5g04885 182 SUPERFAMILY F-box domain 43 90 IPR036047 GO:0005515
Trre5g04885 182 Gene3D - 34 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04885 Trre-Chr5 50635460 50636008 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04885 K14495 - gmx:100527591 256.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04885 5 50635460 50636008 Trre5g04885 5 50635460 50636008 ECH