Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04862 ATGGCCGCACCACTTCTTCTAAGACAGACTCTACTACTTCGCACTCGCTTCCATAACTACAAACACTTTACCATCGGAGCAGTTGCTTCGCGCCACCGCCTATGGTGCAGCGCCTCCATCACACCACCGTCGAATAAACCAAACGATAAACCTAACTCCGTCAACAACACGTTAAATCTCCGCCGAGATAATTACTCGTCGAGTAATTTTCGTTTTGAGGATGAATCTGATTACCGAAAATGGAAGGATAAAGAAAACGAGATTCTCGATGATATTGAACCTATCATTTTGCTTACAAAGGAAATTCTTCACTCACCGAGGTATATGGATGGAGGACGATTGACTGTGGAAGATGAGAAAGCTGTAGTTGAGAAGCTCCTTGCTTATCATCCACACTCTGAAGATAAGATTGGATGTGGTCTTGAATCTATTATGGTTGACCGCCATCCCCAATTTCGACACACAAGGTGTCTTTTTGTTGTAAGAACTGATGGTGGCTGGATTGATTTCTCTTATCAGAAATGTCTTCGAGAATACATTAGAGAGAAGTACCCAGCAAATGCTGAAAGGTTTATTCGAGAACATCTTAAGCGCGGGAGTAGTTGA 606 0.429 MAAPLLLRQTLLLRTRFHNYKHFTIGAVASRHRLWCSASITPPSNKPNDKPNSVNNTLNLRRDNYSSSNFRFEDESDYRKWKDKENEILDDIEPIILLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKIGCGLESIMVDRHPQFRHTRCLFVVRTDGGWIDFSYQKCLREYIREKYPANAERFIREHLKRGSS 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04862 201 PANTHER PROTEIN EMBRYO DEFECTIVE 514 56 199 IPR044673 -
Trre5g04862 201 FunFam Protein DCL, chloroplastic 90 182 - -
Trre5g04862 201 Pfam Protein of unknown function (DUF3223) 100 176 - -
Trre5g04862 201 Gene3D - 91 183 - -
Trre5g04862 201 MobiDBLite consensus disorder prediction 40 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04862 Trre-Chr5 50462506 50467638 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04862 - - mtr:25489911 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04862 5 50462506 50467638 Trre5g04862 5 50462506 50467638 ECH