Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04836 ATGGAAGACGGTGAGATAGAAGAGGGCTCAATCCCCATGGCAGAGGAAGAACAACAACAACAACAACACAGCTTTCATCCTCATTCCTCAGAAGATAACCAATCGGAAGAAGAATCACCATACGAAACACTTCACAACAGCAAATCTTCCATCGAATCCATCATCTCCGATATCCTTTCCATCAAAAAAGAAGCTAAACCTAAACAACTCCTTCGAGATCTCGTTACTCAAATGTTCCTTCACTTCATCACTCTCCGCCAGGCGAACCGTTCTATTTTGATTGAGGAAGATCGTGTTAAAATGGAAACGGAACGGGCGAAGGCACCGGTGGATTTTACGACTTTGCAGCTTCATAATTTGGTGTATGAAAAGAGTCACTACCTTAAAGCGATTAAGGCTTGTAAGGATTTTAAGTCAAAGTATCCTGATATTGAACTTGTGCCTGAGGAAGAATTTTTCCGTGATGCTCCTAAAGATATTAAGGATTCTGTTTTGTCTAAAGACAGTGCTCATAATTTGATGCTCAAGAGGCTCAATTTTGAACTATACCAGCGTAAAGAGCTCTGCAAGCATCATGCAAAACTGGAACAGAAAAAGAAAAGCCTTTTGGAGACTATTGCAAACCGAAAGAAGTTCCTGACAAGTCTCCCTTCACATCTCAAGTCTCTTAAGAAAGCATCCTTGCCTGTACAAAACCAACTAGGAATGATGCATACGAAGAAACTAAAGCAGCATCACTCAGCAGAGTTGCTTCCGCCAGCTCTTTATGTGATTTACTCACAACTATTGTCTCAAAAGGAGGCCTTTGTAGAACCCATTGATCTGGAGATTGTAGGAAGCCTGAAAGATGCTCAAGCTTTTGCTCGCAGTCAAGCCAATAAGGACACTGGCATTTCCACTGTCATGGAGAGTTCCAAATTGGAAGACGATGTTCATGATGATGAAGAAGACGGCCAGAGACATAGAAAAAGGCCAAGAAGGGTAGAAGTCAAGGATAACCATGACCAAGGGGTTCTATTCAAAAGTCACCCACTTAAGATCATTATCCATGTGTATGAGGATGAGACTTCTGATCCTAAGCCTGCAAAACTCATTACTCTGAAGTTTGAGTACATGGTGAAGTTGAATATTGTTTGTGTTGGAATTGAAGGATCTAATGATGGTCCTGACAATGACATCTTATGCAATTTATTCCCCAATGATACAGGACTTGAGCTTCCTCACCAGTCAGCTAAACTCTTTGTTCAAGATGTTACGACATTCAATGCTCAAAGAACTTCACGTCCTTACAAATGGGCTCAGCACCTGGCAGGAATTGATTTCTTGCCTGAGGTGTCTCCATTGCTTCCCACTGATAAGAGTGAAGATGTTGTATCTGGTCTTTCATTGTATCGCCAACAGAACCGAGTTCAGACAGTTCTGCAGAGAATTCGCTCGAGGAGAAAAGCTCAGTTGGCTCTTCTGGAACAGCTAGAATCTCTTACAAAGCTTGAGTGGCCTCTTTTGTCCTGCAAAAGTGTTCCATGGGCTTTGCACACTCCTTTGTGCAAATTGGATGGCTGGTCGCCAATAAGAGCTCTACCTTTACCTGGTGAAGCTTCACCTCCGACTATCATTGATAAAGAGGAGCATGTTCAGGAATCAATGGATGTTGATGTAATTGAAAATTCCGGTGTCACAAAAGACGAACCGGATAGTATGACTGAAGATGGGGAGCTTCCCACCTTACTTCCAAAGACGACTAAGTTTGATCACTCCACACAAGCTAGCTTAATTTCAAAAAGTATCACTCCTTCACTTAATAAAGTTAGGTCACAGAGTTTCAAAAAAGTTGATGATAGTTCTGATTTCTTGCTTGACACTGATAGCGATTTTGATGAGCCTGCACAAATTGAAAGTGAACATGAAAATATCATATCTGATTACCTTGCCAGAAAGTCTCTTTCGTGGATGGATTCTGGTGTGAAGGAATTTTTGCTTGTTCTCAGCAGAAAAACCAATGTGGTTGAGAGAAATGTGAATTTAGAAGCCAAGATCAAGATCAGTATGGAATATCCTCTAAGGCCTCCGCATTTTGCACTGACTCTTTACTATAAACCTTCTGGGGAGAACCATTTTGAGAATGATGGATTGGAATGGTACAATGAACTTCGCGCAATAGAAGCGGAGGTTAACTTACATATGCTAAAGACACTACCTGCCAATGAACATAATTACGTATTGGCTCATCAAGTGAGTTGTCTTGCTATGCTGTTTGACTATTATTTAGATGAGGGGTCACCATCTGAAAGGACAAACTGCACCACCTTGGTTGATGTTGGCTTATGCAAGCCTGTTAGTGGTGGGTTCCTGGGCAGATCTTTTAGGGGAAGGGATCACCGGAAGACAATCTCCTGGAAAGACACGAAATTTACTTCAAGCTGA 2424 0.4171 MEDGEIEEGSIPMAEEEQQQQQHSFHPHSSEDNQSEEESPYETLHNSKSSIESIISDILSIKKEAKPKQLLRDLVTQMFLHFITLRQANRSILIEEDRVKMETERAKAPVDFTTLQLHNLVYEKSHYLKAIKACKDFKSKYPDIELVPEEEFFRDAPKDIKDSVLSKDSAHNLMLKRLNFELYQRKELCKHHAKLEQKKKSLLETIANRKKFLTSLPSHLKSLKKASLPVQNQLGMMHTKKLKQHHSAELLPPALYVIYSQLLSQKEAFVEPIDLEIVGSLKDAQAFARSQANKDTGISTVMESSKLEDDVHDDEEDGQRHRKRPRRVEVKDNHDQGVLFKSHPLKIIIHVYEDETSDPKPAKLITLKFEYMVKLNIVCVGIEGSNDGPDNDILCNLFPNDTGLELPHQSAKLFVQDVTTFNAQRTSRPYKWAQHLAGIDFLPEVSPLLPTDKSEDVVSGLSLYRQQNRVQTVLQRIRSRRKAQLALLEQLESLTKLEWPLLSCKSVPWALHTPLCKLDGWSPIRALPLPGEASPPTIIDKEEHVQESMDVDVIENSGVTKDEPDSMTEDGELPTLLPKTTKFDHSTQASLISKSITPSLNKVRSQSFKKVDDSSDFLLDTDSDFDEPAQIESEHENIISDYLARKSLSWMDSGVKEFLLVLSRKTNVVERNVNLEAKIKISMEYPLRPPHFALTLYYKPSGENHFENDGLEWYNELRAIEAEVNLHMLKTLPANEHNYVLAHQVSCLAMLFDYYLDEGSPSERTNCTTLVDVGLCKPVSGGFLGRSFRGRDHRKTISWKDTKFTSS 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04836 807 MobiDBLite consensus disorder prediction 1 47 - -
Trre5g04836 807 MobiDBLite consensus disorder prediction 29 43 - -
Trre5g04836 807 PANTHER FMS INTERACTING PROTEIN 30 805 IPR019163 -
Trre5g04836 807 MobiDBLite consensus disorder prediction 298 333 - -
Trre5g04836 807 Coils Coil 474 494 - -
Trre5g04836 807 MobiDBLite consensus disorder prediction 14 28 - -
Trre5g04836 807 MobiDBLite consensus disorder prediction 305 333 - -
Trre5g04836 807 Coils Coil 185 205 - -
Trre5g04836 807 Pfam Fms-interacting protein/Thoc5 84 441 IPR019163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04836 Trre-Chr5 50151088 50155735 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04836 K13174 - gmx:100816115 1199.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04836 5 50151088 50155735 Trre5g04836 5 50151088 50155735 ECH