Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04833 ATGCCGCCATTTTTGTCGACCTCAAAGGCACTTCGAACCTTAGCGACACGTAAAAGTGGATTCAATCAATTGATTAGGTCTAGAAAAAGCACCGAGAATTCTGAAGTATGTCGATGCTTTTCAACTATTGCATTTAAACCTACCCATCAGATTCATCCCTTTGGTTCTCGCATTGGGTTTTCACCTTTTACGAGAAATTTTGTTAATAGCAGTTATAAAGCTATCCAATGGAGACAATTTATGGGATGTGGAGATGGTGTTGAAAATGTTCTGTCCAAAACTTATGAGGAGAAGCGCGTTTTGGGGTACTCTCCGGAGCAATTATTTGATGTTGTTGCGGCGGTTGATTTTTATCATGGTTTTGTCCCGTGGTGTCAAAGGTCGGAGATAGTTAAACGTAATCCAGATGGATCATTTGATGCTGAGTTGGAGATTGGATTTAAATTTCTAGTTGAAAGTTATGTTTCTCATGTTGAATTGGACAGACCAAAGCGAATAAAGACAACTGTATCGCAGAGTACCCTATTTGACCATTTGATAAACATATGGGAATTTAGGCCTGGCCCAGTTCCAGGAACTTGCGATCTTTATTTTTTGGTGGACTTCAAGTTCCAGTCTCCACTTTACTCACAGATTGCTTCAATGTTCTTTAAGGAGGTGGCCTCTAGGATGGTTAGTTCATTTACTGAGCGTTGCCGCATGATATATGGACCAGAAGTGCGAGTGCTTGAGAACTCATATGGACATAGGTCATGA 756 0.4061 MPPFLSTSKALRTLATRKSGFNQLIRSRKSTENSEVCRCFSTIAFKPTHQIHPFGSRIGFSPFTRNFVNSSYKAIQWRQFMGCGDGVENVLSKTYEEKRVLGYSPEQLFDVVAAVDFYHGFVPWCQRSEIVKRNPDGSFDAELEIGFKFLVESYVSHVELDRPKRIKTTVSQSTLFDHLINIWEFRPGPVPGTCDLYFLVDFKFQSPLYSQIASMFFKEVASRMVSSFTERCRMIYGPEVRVLENSYGHRS 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04833 251 Pfam Polyketide cyclase / dehydrase and lipid transport 102 228 IPR005031 -
Trre5g04833 251 CDD COQ10p_like 95 235 IPR044996 GO:0006744|GO:0045333|GO:0048039
Trre5g04833 251 Gene3D - 92 237 IPR023393 -
Trre5g04833 251 PANTHER SPERM PROTEIN HOMOLOG 70 247 IPR044996 GO:0006744|GO:0045333|GO:0048039
Trre5g04833 251 SUPERFAMILY Bet v1-like 94 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04833 Trre-Chr5 50104534 50107759 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04833 K18588 - gmx:100778674 397.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04833 5 50104534 50107759 Trre5g04833 5 50104534 50107759 ECH