Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04822 ATGGAGTCTCAGGGACAATGGAACCCTCTTCTATCATTTTCAAGGTTTATCCATCAAAACTGTAACAACCTCGCCACTCATTTCGAACACACCAAACGACTCGCCGGAACCCTAATTCAATCTCATATTCACACTAAACCCGCTTTCGCCGCCACTTTAACTTCCAAAAACGTCGCCAAATCCCTCGTCGGAACCTCCGTTTACACCGTCAGCAGTTCCAACAATGAATTCGTTCTTATATCTGATGCTGAAGGTGCTAAATCCATTGGATTACTTTGCTTTCGCCAAGAAGACGCTGAAGCATTCCTTGCTCAGGTTCGATCGCGGAAAAAAGATATTCGAGGCAATCCTAAGGTTGTTCCCATAACACTTGACCAGGTATACATGTTGAAGGTGGAAGGTATTGCATTCCGATTTTTACCCGACCCTGTTCAAATAAAGAATGCACTGGAGCTCAGAGCTGCCAACAAGGAAGGTTTTGATGGAGTTCCTGTTTTTCAGTCAGACCTTTTGGTTGTGAAGAAGAAGAATAAGCGTTATTGCCCTGTATATTTCTCTAAGGAAGATATTGAACAAGAACTGTCGAAGGTTTCCAGGGCATCTAAAGGTCCTGGAGTTTCTAAGCATATAATGGTTGGTAGCTTAGAAGACGTACTGAAAAAAATGGAGACAAGTGAAAGGGGTTCAGGATGGGATGATTTGATTTTTATTCCCCCAGGAAAACGCCACTCTCAACATATAAAAGAAATTAAGGCTTAA 759 0.4242 MESQGQWNPLLSFSRFIHQNCNNLATHFEHTKRLAGTLIQSHIHTKPAFAATLTSKNVAKSLVGTSVYTVSSSNNEFVLISDAEGAKSIGLLCFRQEDAEAFLAQVRSRKKDIRGNPKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELRAANKEGFDGVPVFQSDLLVVKKKNKRYCPVYFSKEDIEQELSKVSRASKGPGVSKHIMVGSLEDVLKKMETSERGSGWDDLIFIPPGKRHSQHIKEIKA 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04822 252 Gene3D - 66 140 - -
Trre5g04822 252 PANTHER PROTEIN TIC 22, CHLOROPLASTIC 12 247 IPR007378 GO:0015031
Trre5g04822 252 Pfam Tic22-like family 10 249 IPR007378 GO:0015031
Trre5g04822 252 Gene3D - 141 226 - -
Trre5g04822 252 FunFam Protein TIC 22, chloroplastic 57 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04822 Trre-Chr5 49997959 50000920 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04822 - - gmx:100802935 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04822 5 49997959 50000920 Trre5g04822 5 49997959 50000920 ECH