Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04814 ATGCAAGCGGTTGGAAGGTTAGGTAGCTATATCAGTCAAGGCGTATACACCGTTTCCGGTCCTTTTCATCCATTCGGTGGCGCCGTCGATATCGTCGTCGTTCAACAACAAGACGGTTCATTCAAATCATCACCATGGTATGTTCGATTTGGTAAATTCCAAGGTGTTTTAAAATCTAAAGAAAAAATTGTTCAAATCAATGTTAATGGAATTGATGCTGATTTTCAAATGTATCTTGATCATAAAGGAGAAGCATTCTTTTTAAAAGAAATTGATGATGTTGAATCAATTTTAAATATTGATCCATCAGAATCTGGTGATGATGATGCTGATGATCAATCTTTTAGGTCTAAAAATAGTAATTTAGGTTCTGAAGATGGTGGAATTGTAGGGAGAAGTACCTCTCGTCGTTCGCGGATTCTTGGTCTTATGTTTGGGAGAAGATCTTTGAGTGGTGAATTTGAAGATGCTATTGGGAATAAAGAACGCGCCGAGATTGCTGCTAATTTGTTGGATATTAAATGGTCTACAAATGGTGATCATGCTGTGGTTGTGGAGAATGAAGATGGTTCTTTTGGTGTTGTTGCACAACATGAAAAGAAATTGAATGGAGAAGAGGTTTCTGTGGTTCAGGGTGTTGAAGAGAGTTCTAAAGTGAACACGGTTAGTTGTTCGAGTGAACAAACTCATGAGGTTATGAACCTTTCTCATGGAGAGGTCTATGTCCATCATCAAGTCTCGCATTCACTCCCGTCTAAGGGCACGGAAACTGAGAAAGTCACTATGGATGCTGATGTAGTGGAGGTCTTTGAGTTTCATTCTCAGGCTCAGCAAAGGAACTCTTCTGATTCTGAAGCTAGTATGTACGATGTCGATGTGGATATAGGACATTGTTCAAGTGAGAATGTTGGTACCAACGCTTCCAGTTACTACAGCCAGGATGACCAAGGATCATGTGAGAATAACACGAAGGATAGAGATTTCTCTAGCACGTTATCAACTCCACAATACTCTCTTGGTGATTGTTTACCTAGTGAAACATCAAGGAGACCATCGTCCTCGAGTTCAGATGAAGAAAATTTCCTTTTTAGTGACCTTGATGAAAATGCAATCAATGATCGATCTGAGAGATCATTAACCTCTGAATATATAGATAAAGAAGATAATCTTTCTTATGAGAATGGCACTAAACTCTCAAGAGTGACATCCTGTCCCATAGTTATCCCTAGAAATAAGGATGCTGGGGGGGAAGTTGAGCAGCGCACAGGATCCTTGCCAAATGCTTCTTCTGGTAGTAACAGTATGCGCACACATGTTCGTTATCCTTTAAGTCAATCACTGGACTCTACATTTCCTGGTGGAGATGGCTTGAAATGCTTAAAATTAGATGAGTACAAAGAAAAGCAGCTACCGAATGAGCAGGCAGGTGCCAAAGATTACCAAGATTCTGATGAATTCAAAGATACAGCTCTGAATCTCCCTCCTGGAGGTACTTCAACAACCGGCTCTTCACAAGGTACAAATTGGAGAATCTGGCCTTTTCCCTTGAGCAGATCAGTATCTAGAGAATCTTCGCCACCTATTCCAAATGATGATGCCAAAAATACTGCTAATGGCAATTCTCCAGAGAATAAGATTTCCTCAGATGTGAACAAATATGATACTAAACCCCCTAAACCCAATCGAACGAAAAAGAAGATTAGAGAAACAACTCCAACTTCTGAACAGATAGCATCGTTGAATCTGAAGGAAGGGAGGAACGTTGTAACCTTCACTTTTTCTACAGCTATGCTGGGGAATCAGCAGGTTGATGCTCAAATATATCTGTGGAAATGGAACGCTCGCATAGTAATCTCAGATGTGGATGGGACAATTACAAAGTCAGATGTTCTTGGTCAGTTCATGCCTTTGGTTGGTGTTGACTGGTCACAGACTGGTGTTGCACATTTATTCTCCGCTGTCAAGGAGAATGGTTACCAACTGCTTTTTCTCAGTGCTCGTTCAATTTCTCAAGCCTATATTACACGACAATTCCTACTTAATCTTAAACAGGATGGAAAAGTTTTACCAGAGGGCCCTGTTGTTATTTCCCCCGATGGACTTTTTCCCTCTCTATACCGTGAAGTTATTAGGAGGGTTCCTCATGAATTCAAAATTGCATGCTTAGAGACTATCAAGGCTCTTTTTCCTTCTGATTGCAATCCGTTCTATGCTGGTTTTGGAAATCGAGATACTGACGAAATCAGTTACCTTAAAGTTGGAATCCCTTTAGGAAAAATCTTCATTATAAATCCCAAGGGAGAGATAGTTGTGAACCGAAGTCTTGACACAAAATCATATACTTCTATGCATGCTCTCGTGAATGGAATGTTCCCCCCAACAAGCTCTTCTGAGCAGGAGGATTTTAATTCGTGGAATTTCTGGAAGCTACCTCCTTCTGCAATTGATTTTTGA 2454 0.4034 MQAVGRLGSYISQGVYTVSGPFHPFGGAVDIVVVQQQDGSFKSSPWYVRFGKFQGVLKSKEKIVQINVNGIDADFQMYLDHKGEAFFLKEIDDVESILNIDPSESGDDDADDQSFRSKNSNLGSEDGGIVGRSTSRRSRILGLMFGRRSLSGEFEDAIGNKERAEIAANLLDIKWSTNGDHAVVVENEDGSFGVVAQHEKKLNGEEVSVVQGVEESSKVNTVSCSSEQTHEVMNLSHGEVYVHHQVSHSLPSKGTETEKVTMDADVVEVFEFHSQAQQRNSSDSEASMYDVDVDIGHCSSENVGTNASSYYSQDDQGSCENNTKDRDFSSTLSTPQYSLGDCLPSETSRRPSSSSSDEENFLFSDLDENAINDRSERSLTSEYIDKEDNLSYENGTKLSRVTSCPIVIPRNKDAGGEVEQRTGSLPNASSGSNSMRTHVRYPLSQSLDSTFPGGDGLKCLKLDEYKEKQLPNEQAGAKDYQDSDEFKDTALNLPPGGTSTTGSSQGTNWRIWPFPLSRSVSRESSPPIPNDDAKNTANGNSPENKISSDVNKYDTKPPKPNRTKKKIRETTPTSEQIASLNLKEGRNVVTFTFSTAMLGNQQVDAQIYLWKWNARIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAVKENGYQLLFLSARSISQAYITRQFLLNLKQDGKVLPEGPVVISPDGLFPSLYREVIRRVPHEFKIACLETIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPLGKIFIINPKGEIVVNRSLDTKSYTSMHALVNGMFPPTSSSEQEDFNSWNFWKLPPSAIDF 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04814 817 MobiDBLite consensus disorder prediction 99 131 - -
Trre5g04814 817 MobiDBLite consensus disorder prediction 549 571 - -
Trre5g04814 817 MobiDBLite consensus disorder prediction 471 575 - -
Trre5g04814 817 SMART lns2 616 772 IPR031315 -
Trre5g04814 817 SUPERFAMILY HAD-like 608 760 IPR036412 -
Trre5g04814 817 PANTHER LIPIN 489 816 IPR026058 -
Trre5g04814 817 Pfam LNS2 (Lipin/Ned1/Smp2) 570 792 IPR013209 -
Trre5g04814 817 Pfam lipin, N-terminal conserved region 1 94 IPR007651 -
Trre5g04814 817 MobiDBLite consensus disorder prediction 471 486 - -
Trre5g04814 817 MobiDBLite consensus disorder prediction 493 548 - -
Trre5g04814 817 MobiDBLite consensus disorder prediction 302 368 - -
Trre5g04814 817 MobiDBLite consensus disorder prediction 410 436 - -
Trre5g04814 817 MobiDBLite consensus disorder prediction 422 436 - -
Trre5g04814 817 MobiDBLite consensus disorder prediction 302 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04814 Trre-Chr5 49974563 49981628 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04814 K15728 - gmx:100811824 939.488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04814 5 49974563 49981628 Trre5g04814 5 49974563 49981628 ECH