Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04760 ATGGGTACGGATTCCAATGGATGGAACCGTGCTCGAGGATTAGCAGTCAAGGCTCTCTTACTCATCGGTGGTGCTCTTCTCGTTAAACGTCTCCGTAAGTCTACCACTCGTTGGGACCATGCTCGTTTAGTCGCCCAGTCTCTTACCGGCGAAAAGTATTCTAAAGACCAAGCTTCCAGAGACCCTGATAACTACTTCAATATTAGAATGCTTACATGTCCAGCAGCAGAGTTAGTAGATGGTTCAAAGGTTCTATATTTTGAGCAGGCTTTTTGGAGGAGTCCGCAGAAACCCTTTCGCCAGAGATTGTTAATGGCGAAACCTTGTCCAAAAGAGTTGAAATGTGATGTCGAGTTAAGTACATATGCAATTAGAGATATGGAGGAATACAAAAATTTCTGTGATCGGCCAAGGGATCAGCGTCCGCAACCAGAAGAAGTCATTGGGGATATTGGAGAGCATTTGACAACAATACATCTTAAGCGTTGTTCACGTGGAAAACGTTGCTTATATGAAGGTTCAACTCCACCTGGCGGATTTCCTAATACATGGAATGGAGCAGCCTACTGTACTTCGGAACTTTCCATTATGAAGAACAATGAGATACACACCTGGGATCGAGGATATGACGACGATGGAAATCAAGTTTGGGGACAAAAAGATGGCCCTTACGAATTCAAGCCTGCACCAACCTCCTGTTTTAATGATATGTTCTCACCCTTGAATTTCCCCCCTCCACCATCCACAGAGAGAAGAATAGAGGGTTCATTTATTTTGCAAGAATGA 786 0.4402 MGTDSNGWNRARGLAVKALLLIGGALLVKRLRKSTTRWDHARLVAQSLTGEKYSKDQASRDPDNYFNIRMLTCPAAELVDGSKVLYFEQAFWRSPQKPFRQRLLMAKPCPKELKCDVELSTYAIRDMEEYKNFCDRPRDQRPQPEEVIGDIGEHLTTIHLKRCSRGKRCLYEGSTPPGGFPNTWNGAAYCTSELSIMKNNEIHTWDRGYDDDGNQVWGQKDGPYEFKPAPTSCFNDMFSPLNFPPPPSTERRIEGSFILQE 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04760 261 PANTHER CHROMOPHORE LYASE CRL, CHLOROPLASTIC 3 261 IPR010404 GO:0016829|GO:0017009
Trre5g04760 261 Gene3D CpcT/CpeT domain 38 234 IPR038672 -
Trre5g04760 261 CDD CpcT 42 229 IPR010404 GO:0016829|GO:0017009
Trre5g04760 261 Pfam CpeT/CpcT family (DUF1001) 44 227 IPR010404 GO:0016829|GO:0017009
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04760 Trre-Chr5 49467977 49472169 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04760 - - gmx:100800615 512.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04760 5 49467977 49472169 Trre5g04760 5 49467977 49472169 ECH