Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04759 ATGGCCCTGCAAGTGCAGGCCACTCTTCACACTACAAGATCCTCCCCACCTTCATTATCATCCTCTAACCCACTCCGACCATCTTCCAATCAACTTGCTTTGAAGACATCTTTCTTCTCTCGTTCTCTTAACCTCTTACAACAACAACAACAACAAAGTCTTGTTTATGGACCTCCTAAGTTTACCATGCGTGTAGCTTCCAAACAAGCCTATATCTGTCGTGATTGCGGGTATATTTACAATGAGAGGACCGCTTTTGATAAATTGCCTGATAAATACTTCTGCCCTGTTTGTGGTGCTCCCAAAAGAAGGTTTAAGCCATATGCAACAGAAGTCAACAAAAAAGCAAATGAAACAGATGTTAGAAAGGCAAGAAAAGCTGAACTCCAAAGAGATGAAGCAGTTGGGAAAGCACTTCCTATTGCAGTTGTCGTGGGAGTTGTTGCTCTTGCAGGATTATACTTCTACCTGAACAGCACATTTTAG 486 0.4218 MALQVQATLHTTRSSPPSLSSSNPLRPSSNQLALKTSFFSRSLNLLQQQQQQSLVYGPPKFTMRVASKQAYICRDCGYIYNERTAFDKLPDKYFCPVCGAPKRRFKPYATEVNKKANETDVRKARKAELQRDEAVGKALPIAVVVGVVALAGLYFYLNSTF 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04759 161 Pfam Rubredoxin 71 105 IPR024935 GO:0005506
Trre5g04759 161 CDD rubredoxin 71 108 IPR024935 GO:0005506
Trre5g04759 161 ProSiteProfiles Rubredoxin-like domain profile. 68 108 IPR024934 GO:0005506
Trre5g04759 161 MobiDBLite consensus disorder prediction 1 28 - -
Trre5g04759 161 PANTHER RUBREDOXIN-LIKE SUPERFAMILY PROTEIN 1 161 - -
Trre5g04759 161 SUPERFAMILY Rubredoxin-like 68 113 - -
Trre5g04759 161 Gene3D - 68 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04759 Trre-Chr5 49465683 49467166 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04759 - - zju:107423511 191.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04759 5 49465683 49467166 Trre5g04759 5 49465683 49467166 ECH