Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04757 ATGGAAACAGTCACCCCTGAGCCTGGAAAATCATCACCACCATTGGATGATTCCAAACATGAAACAATTCTTGTTCAACATGATGGAGCTACTTTGAAAGATAGCACAGAAGCAGAACTCACCAAAATTAGCCTCATGAGAGCTTTTGTTGAAAGCCGTGACCCTTCTTCTAAGGAAGTAGATGATTTGATGATTAGAAGATTTTTGAGAGCTCGAGATTTAGATGTAGAGAAAGCTTCATCAATGTTTCTCAAGTACTTGAAATGGAAACATTCATTCATTCCAAATGGTTCTGTTTCCCCTTCAGAGATCTCTGATGATCTTGCACAAGAAAAGATGTATGTTCAAGGAGTGGATAAAAAGGGTCGACCTATAACTGTTGCTTTTGCTGCTAAACATTTTCAAAACAAAAATGGTTTGGATGCATTCAAACGGTATGTGGTTTTTGCTCTTGAGAAACTATGTTCAAGGATGCCACCAGGGGAAGAAAAGTTTCTTGCAATTGCAGATATTAAGGGATGGGGATATGCAAACAGTGATCTTCGTGGATACCTTGGTGCTCTAACCATTCTACAAGATTACTATCCAGAGAGATTAGGAAAATTGTTCATAGTCCATGCACCTTACATGTTTATGAAAGTGTGGAAACTTATTTACCCCTTCATTGATGACAATACCAAGAAGAAGATAGTATTTGTTGAGAACAAGAAGCTGAAATCAACATTACTTGAAGAGATTGATGAGAGTCAGCTCCCAGAGATATATGGAGGCCAACTTGCATTAGTAACAATACAGGATTCATGA 804 0.3806 METVTPEPGKSSPPLDDSKHETILVQHDGATLKDSTEAELTKISLMRAFVESRDPSSKEVDDLMIRRFLRARDLDVEKASSMFLKYLKWKHSFIPNGSVSPSEISDDLAQEKMYVQGVDKKGRPITVAFAAKHFQNKNGLDAFKRYVVFALEKLCSRMPPGEEKFLAIADIKGWGYANSDLRGYLGALTILQDYYPERLGKLFIVHAPYMFMKVWKLIYPFIDDNTKKKIVFVENKKLKSTLLEEIDESQLPEIYGGQLALVTIQDS 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04757 267 Gene3D - 11 266 IPR036865 -
Trre5g04757 267 CDD SEC14 114 258 IPR001251 -
Trre5g04757 267 SUPERFAMILY CRAL/TRIO N-terminal domain 23 93 IPR036273 -
Trre5g04757 267 PANTHER OS03G0850700 PROTEIN 33 266 - -
Trre5g04757 267 SMART sec14_4 107 260 IPR001251 -
Trre5g04757 267 MobiDBLite consensus disorder prediction 1 22 - -
Trre5g04757 267 Pfam CRAL/TRIO domain 111 257 IPR001251 -
Trre5g04757 267 SUPERFAMILY CRAL/TRIO domain 103 259 IPR036865 -
Trre5g04757 267 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 101 263 IPR001251 -
Trre5g04757 267 SMART CRAL_TRIO_N_2 61 86 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04757 Trre-Chr5 49417017 49419637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04757 67 253 Acyl Lipid Metabolism Gene Families AT1G55840 27.143 1.78e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04757 - - gmx:100797666 424.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04757 5 49417017 49419637 Trre5g04757 5 49417017 49419637 ECH