Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04681 ATGACTAAGTTGTGGACTTTAATCACCCAGCTTCATTCTCTTGCTGGGCCAGTTTTGACGTTATTGTACCCTTTGTATGCATCGGTGGTAGCTATAGAGAGTCCATCCAAGCTGGATGATGAACAGTGGCTAGCTTATTGGATAATCTATTCCTTTCTCACCCTTGGGGAAATGCTTGCTCAACCTGCTTTAGAGTGGATACCAATTTGGTATGATGTGAAGTTATTGGTGGCAGCATGGTTGGTGTTGCCACAGTTTAAAGGAGCGGCTTACTTGTATGAGAGGTTTGTGAGAGATCATATAAGGAAATATGTGACGGAGAAGGAGCACCAAAGGGTCTACCACCATCCTCCTCCTCCTCCTGAGAAACAGCGGCAGCAACAGAACAAAAAGTTATCACCCAGTGGAAGTAAGACCAAGAAGAAGTTCGTTGATTTCATCCTTCCTAAGAAAGGAGATCAGGAAGCTTATTGA 474 0.4409 MTKLWTLITQLHSLAGPVLTLLYPLYASVVAIESPSKLDDEQWLAYWIIYSFLTLGEMLAQPALEWIPIWYDVKLLVAAWLVLPQFKGAAYLYERFVRDHIRKYVTEKEHQRVYHHPPPPPEKQRQQQNKKLSPSGSKTKKKFVDFILPKKGDQEAY 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04681 157 MobiDBLite consensus disorder prediction 109 157 - -
Trre5g04681 157 MobiDBLite consensus disorder prediction 143 157 - -
Trre5g04681 157 PANTHER HVA22-LIKE PROTEINS 17 112 IPR004345 -
Trre5g04681 157 Pfam TB2/DP1, HVA22 family 24 98 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04681 Trre-Chr5 48780259 48781286 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04681 K17279 - gmx:100305818 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04681 5 48780259 48781286 Trre5g04681 5 48780259 48781286 ECH