Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04671 ATGGAGAACCGTTCTTTTGATCATATGTTGGGGTGGATGAAGAAAGCTATCAACCCTTTAATTGATGGTGTTAATGGAGATGAATGCAATCCAGTTTCTACTGAAAGTCCAAGAAAAGATACAATTTGTTTCAGTGATGATGCTGAGTTTGTGGATCCGGATCCAGGTCATTCATTTGAGGATGTTTTGCAACAGGTATTTGGTAATGGTTCTATTCCTTCAATGAATGGTTTTGTGGAACAAGCATTGTCTGTGTCTCAGAATCTTTCTGAGACTGTAATGAAAGGGTTTAAACCACAATCTGTTCCTGTTTATGCTGCTTTGGTTAAGGAATTTGCTGTTTTTGATAGATGGTTTTCTTCAATTCCTGGTCCAACACAACCTAATAGGCTTTTTGTGTATTCTGCAACTTCTCATGGTTCAACAAGTCATGTCAAGAGACAGTTAGCAAAAGGGTATCCTCAAAAAACAATCTTTGATTCTATGCATCAGAATGGTTTGGACTTTGGAATTTATTTTCAAAACATACCAACAACTCTTTTCTATAGAAATCTAAGGAAATTGAAATACATATCCAAATTTCATCAGTATGATTTGAAGTTCAAGAAAGATGCTAGAAATGGGATGCTTCCACCTTTGACAGTGATTGAGCCTAGGTACTTTGACTTGGTCGGTTTGCCGGCAAATGATGATCATCCATCTCATGATGTTGCAAATGGACAAATGCTTGTTAAAGAGGTTTATGAGAGTCTAAGAGCAAGTCCACAGTGGAATGAAACTCTTTTGGTCATTACATATGATGAGCATGGTGGATTTTTTGATCATGTCAAGACTCCTTTTGTTAACATTCCTAGTCCAGATGGGAACACAGGACCTGCTCCTTATTTCTTCAAGTTTGATAGGTTAGGCGTTCGGGTGCCAACTATTATGGTCTCTCCTTGGATTAAGAAAGGGATTGTGATGAGAAGCCCCAAAGGACCGGCTCCGAACTCCGAGTTTGAGCACTCGTCAATTCCTGCCACCATAAAGAAGATGTTCAACCTCTCCTCTAACTTTTTGACTCACAGAGATGCATGGGCTGGTACATTTGAGGATGTTGTTGGGGAGTTAAGTTCACCTAGAACGGATTGTCCAGTGACTTTGCCGGACGTGACGCCTCTAAGGAGAACTGAAGCAAAAGAAAATGATGGCCTCTCTGAGTTTCAAAGTGAGGTAGTTCAGTTGGCAGCTGTTCTGAATGGAGACCACTTCTTGAGCAGTTTCCCGGATGAAATGAGTAAGAAGATGAGTGTGAAAGAAGCTCATGATTATGTGAAGGGAGCTGTTTCAAGATTCATAAGAGCTAGCAAAGAGGCTATCAAGTTAGGGGCAGATGAGTCTGCTATTGTAGATATGAGATCCTCACTCACTACCAGATCATCAGTTCATAATTAA 1434 0.401 MENRSFDHMLGWMKKAINPLIDGVNGDECNPVSTESPRKDTICFSDDAEFVDPDPGHSFEDVLQQVFGNGSIPSMNGFVEQALSVSQNLSETVMKGFKPQSVPVYAALVKEFAVFDRWFSSIPGPTQPNRLFVYSATSHGSTSHVKRQLAKGYPQKTIFDSMHQNGLDFGIYFQNIPTTLFYRNLRKLKYISKFHQYDLKFKKDARNGMLPPLTVIEPRYFDLVGLPANDDHPSHDVANGQMLVKEVYESLRASPQWNETLLVITYDEHGGFFDHVKTPFVNIPSPDGNTGPAPYFFKFDRLGVRVPTIMVSPWIKKGIVMRSPKGPAPNSEFEHSSIPATIKKMFNLSSNFLTHRDAWAGTFEDVVGELSSPRTDCPVTLPDVTPLRRTEAKENDGLSEFQSEVVQLAAVLNGDHFLSSFPDEMSKKMSVKEAHDYVKGAVSRFIRASKEAIKLGADESAIVDMRSSLTTRSSVHN 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04671 477 SUPERFAMILY Alkaline phosphatase-like 108 324 IPR017850 -
Trre5g04671 477 PANTHER NON-SPECIFIC PHOSPHOLIPASE C4-RELATED 1 448 IPR007312 GO:0016788
Trre5g04671 477 FunFam Non-specific phospholipase C1 209 396 - -
Trre5g04671 477 Pfam Phosphoesterase family 1 348 IPR007312 GO:0016788
Trre5g04671 477 Gene3D Alkaline Phosphatase, subunit A 221 396 IPR017850 -
Trre5g04671 477 Gene3D Alkaline Phosphatase, subunit A 1 154 IPR017850 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04671 Trre-Chr5 48699153 48701108 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04671 1 472 Acyl Lipid Metabolism Gene Families AT3G48610 80.802 0.0 808
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04671 K01114 - gmx:100786332 901.738