Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04663 ATGGCTGCCGCCGCCGCCACCACCACTCCTTCCAGATCTCCCTTCCATTCTTCATCTTCTTCCCATTCAACTTTCCCTAAACGAAACACAACACTCACATTCCCACTCTCTCCCATTTACAACAAACCAATTCACTCTCGTCCCTTCACCATCCCTATCTCATGCTCCGCCGCACCACCTTCCACCACCACCATCTCAACCACCACCTCCACCGAGCCTTTCATCTCTCGTTTCTCCCCTACCGAACCACGAAAAGGCTCTGACATTCTCGTTGAAGCCTTAGAACGTCAAGGCGTAACCAATGTCTTCGCTTACCCCGGTGGAGCTTCCATGGAGATCCACCAAGCTCTAACCCGCTCCAAAACAATCCGTAACATACTTCCACGTCATGAACAAGGTGGAGTTTTCGCCGCCGAAGGTTACGCTCGTTCCTCCGGTCTCCCCGGTGTTTGCATCGCCACTTCCGGTCCCGGCGCCACCAACTTAGTCAGCGGCCTTGCCGACGCTTTAATGGATAGCATCCCTCTCATCGCCATCACCGGTCAAGTTCCCCGGAGAATGATCGGAACCGATGCTTTTCAAGAAACCCCAATCGTTGAAGTAACGAGATCTATCACAAAACATAATTATCTCATTCTTGATGTTGATGATATTCCTAGGGTTGTTAAAGAGGCTTTTTTTATTGCAACTTCGGGCCGGCCCGGCCCGGTTCTCATTGATGTACCTAAAGATGTTCAACAGCAGTTAGCTGTTCCTAATTGGGCTGAGCCCATTAAGCTCACTGGGTATCTTTCCAGGTTACCTAAGATTCCTAATGAGGTCCAATTAGAACAGGTTTTGAGGTTGTTGTTAGAATCTAAAAAACCGGTTTTGTATGTTGGTGGTGGTTGTTTGAATTCAAGTGAGGAATTAAACCGGTTTGTTGAATTAACTGGTATTCCTGTTGCTAGTACTTTAATGGGACTAGGTAGTTACCCTATTGGAGCTGAACATTCCCTTTCAATGTTGGGTATGCATGGAACTGTTTATGCTAATTATGCTGTTGATAATAGTGATTTGTTGCTTGCTTTCGGGGTTAGGTTCGATGATCGTGTAACGGGTAAGTTAGAAGCTTTTGCTAGTAGGGCTAAGATTGTTCATATAGATATTGATTCAGCTGAGATTGGGAAGAATAAGATTCCACATTTGTCGATTTGTGCTGATATGAAGGTAGCATTGGAAGGTCTTAATAGGGTTTTGGAGAGTAAAGGAATTAAGGGTAAACTTGATTTTGAGTCATGGAGGAATGAGTTGAATGTTCAGAAGTTGAAGTTTCCTCTTGGTTTTAAGACGTTTGAGGATGCGATTTCGCCGCAGTATGCTATTAAAGTGCTTGATGAGTTGACTAATGGTGAGGCTATTGTTAGTACTGGTGTTGGACAGCATCAAATGTGGGCTGCTCAGTTTTATAAGTATAAGAGACCTAGGCAGTGGTTAACTTCGGCTGGACTCGGTGCGATGGGTTTTGGATTGCCTGCTGCTATTGGTGCTGCTGTTGCTAACCCTGATGCGATCGTTGTTGATATTGATGGTGATGGTAGTTTTATGATGAATGTTCAAGAGTTGGCTACTATAAGAGTGGAGAATCTTCCAGTTAAGATATTGTTGTTGAATAATCAACATTTGGGTATGGTTGTGCAGTGGGAGGATAGGTTCTATAAGTCTAATAGAGCTCATACTTATCTTGGTGACCCTTCTAAGGAGGATGAGATTTTCCCTAACATGCTTGGATTTGCAGATGCTTGTGGAATACCGGCCGCTCGTGTGACGAAGAAGGAAGAGCTAAGAGAAGCTATTCAGAAAATGTTGGACACTCCTGGTCCTTATCTTCTTGATGTTATTGTACCTCATCAAGAACATGTCTTACCAATGATTCCAAGTAATGGATCTTTCAAGGATGTGATCACTGAAGGTGATGGCAGAAGGAGTTACTGA 1974 0.4448 MAAAAATTTPSRSPFHSSSSSHSTFPKRNTTLTFPLSPIYNKPIHSRPFTIPISCSAAPPSTTTISTTTSTEPFISRFSPTEPRKGSDILVEALERQGVTNVFAYPGGASMEIHQALTRSKTIRNILPRHEQGGVFAAEGYARSSGLPGVCIATSGPGATNLVSGLADALMDSIPLIAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLILDVDDIPRVVKEAFFIATSGRPGPVLIDVPKDVQQQLAVPNWAEPIKLTGYLSRLPKIPNEVQLEQVLRLLLESKKPVLYVGGGCLNSSEELNRFVELTGIPVASTLMGLGSYPIGAEHSLSMLGMHGTVYANYAVDNSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKIPHLSICADMKVALEGLNRVLESKGIKGKLDFESWRNELNVQKLKFPLGFKTFEDAISPQYAIKVLDELTNGEAIVSTGVGQHQMWAAQFYKYKRPRQWLTSAGLGAMGFGLPAAIGAAVANPDAIVVDIDGDGSFMMNVQELATIRVENLPVKILLLNNQHLGMVVQWEDRFYKSNRAHTYLGDPSKEDEIFPNMLGFADACGIPAARVTKKEELREAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSNGSFKDVITEGDGRRSY 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04663 657 FunFam Acetolactate synthase 79 261 - -
Trre5g04663 657 Pfam Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 471 626 IPR011766 GO:0003824|GO:0030976
Trre5g04663 657 NCBIfam biosynthetic-type acetolactate synthase large subunit 85 649 IPR012846 GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660
Trre5g04663 657 ProSitePatterns Thiamine pyrophosphate enzymes signature. 508 527 IPR000399 GO:0000287|GO:0030976
Trre5g04663 657 MobiDBLite consensus disorder prediction 62 81 - -
Trre5g04663 657 CDD TPP_PYR_POX_like 88 243 - -
Trre5g04663 657 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 448 649 IPR029061 -
Trre5g04663 657 Pfam Thiamine pyrophosphate enzyme, central domain 277 409 IPR012000 GO:0000287|GO:0030976
Trre5g04663 657 FunFam Acetolactate synthase 269 440 - -
Trre5g04663 657 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 79 260 IPR029061 -
Trre5g04663 657 Gene3D - 441 627 - -
Trre5g04663 657 SUPERFAMILY DHS-like NAD/FAD-binding domain 272 439 IPR029035 -
Trre5g04663 657 Gene3D - 276 440 - -
Trre5g04663 657 MobiDBLite consensus disorder prediction 62 77 - -
Trre5g04663 657 CDD TPP_AHAS 449 640 IPR039368 GO:0030976
Trre5g04663 657 MobiDBLite consensus disorder prediction 1 28 - -
Trre5g04663 657 FunFam Acetolactate synthase, mitochondrial 440 655 - -
Trre5g04663 657 Pfam Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 85 248 IPR012001 GO:0030976
Trre5g04663 657 Gene3D - 74 267 - -
Trre5g04663 657 PANTHER THIAMINE PYROPHOSPHATE ENZYMES 83 646 IPR045229 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04663 Trre-Chr5 48654098 48656071 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04663 K01652 - gmx:100798203 1056.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04663 5 48654098 48656071 Trre5g04663 5 48654098 48656071 ECH