Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04660 ATGAGGGAGCAATCTGAAAGCGGGGGCAGGACTGCCAAGCCTAAAACAGGCACAAGGGAGAAGAAGAAAAACGAGTTTGAGTTCTGTAAGGTCTGCAAAATAAATCACGATCAAGGTCTCCGGCACAAGTACTTCCCCAAGCACAAACAATCCCTTTCCACCTTCCTCTCTCGCTTCCAAAACAAACTCTCTGATGTTCGCTTCTTCCTTAAAACGCCTACCCCTCTTGATCCCCAACTTGCTTCCCGTAATCACTTATGGTGTGTTTTCTGTGAAGAAGATATCGACGAGCTCTCCAGTTCCTTTGCCTGTGAAAATGCAATTCGTCACCTAGCAAGTGTTGAACATGTGAAGAATTTGAAGCACTTCTTTTGGAAATATGGTGGCAACATGGATCAGCTGGATGTGTTTACAGTTTCCGATAATGACGTTGTGAAGTGGGAAAAGAAGTGCAAGGCCCTTAAAAAAGAAGCTTCATTGCAAAGTGAGGGAAGTGCTGGAGCAGTTGGACCTTCAAGTGATATCCATAATCAATTAAACAATGGAAATATTGATAGTTTTGAAAATATTTATTCCCATTCTGTGAAATCATATCCTTCAAATGTTGTTTTGCCTTTACACTGCTACACAAATGAGAATCAGGTATCCTCTTCAGAACACTCTGGAGTTGGAAATACTGGCCTATTAGATATCGGTAACACTTCTTTACCTTCGGAAGCGTGCTCTAGTGCAAATCCTCTTGCTTTGCAGGATTTTGCAGTGAAAAGGAGAAGCGATTCTCTCTCTTCTAATGGCGGACAATGGTCAAGTGATGGTTACTCCTGTAATAAAACTCAGCTTCTTGATAATGGTAAAGTGGCCAACGGAGAGAGCATTCAGCAAGGTATACAGATCCTCACCCGAATCTCGTTTGTGCCTGCTGAAAATAATGGTGGAAATGTTCATTCCGGAGCACCTCCACCTTGGTTTGAATCAACTGAGGGAATTCAGATACCTTTTAAGCCTGTTTTAAGAGACAGTATCTCCCATTCAAACAAGTCAGGGAAGCACAAAAAGCTGAATCCTAAACGTGTTGGAGCTGCTTGGGCAGAAAAGAGAAAGATTGAAATGGAGATGGAAAAGAGGGGGGAGATTGTGCGCAACGAATGTGATGCCAACTGGCTTCCTAATTTTGGTAGAGTTTGGCAATCTGGTAGCAGAAGAGAATCCAAAAAAGAATTTGAAAAGGAGAAACATGAGTTGTTAAATGTTGAAACTCAATCTGAGATGCCAATCAAGATACAACCTTATGTTAGCAAAAGAATGGTGCGTTTTACAGTCTAA 1323 0.4187 MREQSESGGRTAKPKTGTREKKKNEFEFCKVCKINHDQGLRHKYFPKHKQSLSTFLSRFQNKLSDVRFFLKTPTPLDPQLASRNHLWCVFCEEDIDELSSSFACENAIRHLASVEHVKNLKHFFWKYGGNMDQLDVFTVSDNDVVKWEKKCKALKKEASLQSEGSAGAVGPSSDIHNQLNNGNIDSFENIYSHSVKSYPSNVVLPLHCYTNENQVSSSEHSGVGNTGLLDIGNTSLPSEACSSANPLALQDFAVKRRSDSLSSNGGQWSSDGYSCNKTQLLDNGKVANGESIQQGIQILTRISFVPAENNGGNVHSGAPPPWFESTEGIQIPFKPVLRDSISHSNKSGKHKKLNPKRVGAAWAEKRKIEMEMEKRGEIVRNECDANWLPNFGRVWQSGSRRESKKEFEKEKHELLNVETQSEMPIKIQPYVSKRMVRFTV 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04660 440 PANTHER COILED-COIL DOMAIN-CONTAINING PROTEIN 84 19 435 IPR028015 -
Trre5g04660 440 Coils Coil 400 420 - -
Trre5g04660 440 Pfam Coiled coil protein 84 28 413 IPR028015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04660 Trre-Chr5 48646110 48648366 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04660 K26160 - mtr:25486600 710.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04660 5 48646110 48648366 Trre5g04660 5 48646110 48648366 ECH