Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04613 ATGGCAGAAGGAAAAGAAGAAGAAAAAACAGAGAGAAAAATGAAGAAAATTCTTCTCATAATTAATTGCTTAATCTTAGCCTTAGGAAACTCCGGTGGGCCCCTCATCATGCGTCTCTACTTCATCCACGGCGGCAAACGCGTCTGGCTTTCAAGTTTCCTCGAAACCGCCGGTTTCCCCTTAATGCTCATTCCTCTAACTGTCTCTTACATCAAACGCCGCCGTATCAACCACCGTCCACCACCGTCAACAACCACCGTAATCACAAAATCAAATCTAATCTCAATGAAACCTCCTTTATTCTTCGCCGCAGCTTTCATCGGAATCCTCACCGGTCTCGACGATTATCTCTACGCATTCGGCGTTGCTCGGCTTCCGATCTCCACTTCGGCTTTAATAATCGCTTCTCAGCTTGGTTTTACGGCGGTTTTTGCTTTTATTCTTGTGAAACAGAAATTTACAGCTTTTTCTGTAAACGCTGTCGTTTTGCTTACGGTTGGAGCTGGTGTTTTGGCCATGCATACAAGTGGTGATAGACCTGCTGGTGTTTCTGTTAGACAATATGTTATTGGTTTTCTTGCTACTGTTGCTGCTTCTGCATTATATGGATTTGTTTTGCCTTTAATTGAATTGGTTTATAAGAAAACCAAACAGCCCCTAACTTATTCTCTTGTCATGGAAATTCAGTTTGTTATGTGTTTATTTGCTACTCTCTTTTGCGCCGTTGGCATGATCGTAAACAACGACTTTAAGGTGATACCAAGGGAAGCAAGGAATTTTGGTCTTGGAGAAAGAACATACTATGTGGTGTTGGTGGTGAGTGCAATAATGTGGCAAGCATTTTTTTTGGGAGCAATTGGGGTTATTTTTTGTGCTTCCTCGTTATTGTCGGGTATTTTGATTGCTGTGTTGTTGCCACTAACAGAAGTGTTGGCAGTTATTTTCTATAAAGAAAGTTTCAAAGCTGAAAAAGGGGTTTCTCTTGTACTTTCACTTTGGGGGTTTGTGTCTTATTTTTATGGTGAGATTAAACATGCTAAGAAACAAAAGAAGAAAATTGTTTTAGAAACAGAATTGGGTCAAACTATTGATGTTGTATCTGTTCCGTGA 1110 0.4054 MAEGKEEEKTERKMKKILLIINCLILALGNSGGPLIMRLYFIHGGKRVWLSSFLETAGFPLMLIPLTVSYIKRRRINHRPPPSTTTVITKSNLISMKPPLFFAAAFIGILTGLDDYLYAFGVARLPISTSALIIASQLGFTAVFAFILVKQKFTAFSVNAVVLLTVGAGVLAMHTSGDRPAGVSVRQYVIGFLATVAASALYGFVLPLIELVYKKTKQPLTYSLVMEIQFVMCLFATLFCAVGMIVNNDFKVIPREARNFGLGERTYYVVLVVSAIMWQAFFLGAIGVIFCASSLLSGILIAVLLPLTEVLAVIFYKESFKAEKGVSLVLSLWGFVSYFYGEIKHAKKQKKKIVLETELGQTIDVVSVP 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04613 369 PANTHER OS09G0467300 PROTEIN-RELATED 7 352 IPR030182 GO:0015211|GO:0016020
Trre5g04613 369 Pfam Purine nucleobase transmembrane transport 17 348 - -
Trre5g04613 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 97 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04613 Trre-Chr5 48143751 48145506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04613 14 351 Organic Solute Cotransporters AT1G28220 60.355 1.40e-150 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04613 - - gmx:100803818 501.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04613 5 48143751 48145506 Trre5g04613 5 48143751 48145506 ECH
Trre5g04613 5 48143751 48145506 Trre9g04888 9 55219978 55221088 PCT