Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04607 ATGGCAGTTTATTCAACTACCTTATTCAATTTCCATTCATTCCCATTCAATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATTCTCTCATCAATTCCATTTCCAAAATCTCAAACTCAAAAACCTAATCCCAATGTCTTCATTACTTCCTATAAAATCACCCTTTCATTTACCTTCCAAAACCAGATTCAACCGAACTCATCCAACCGTTTATAAATTCCGCACTTCATCCACTGCAACTAACCGAACCGTTTTCTTATCCGTTACTACCGTTAGTTTAGCCGTTGCTAATCGCGTCCTTTATAAACTAGCTCTTGTTCCTTTGAATAATTATCCTTTTTTTCTCGCTCAGTTCACTACTTTTGGGTATGTTGTTATATATTTTAGCATCTTGTATATACGATACCGGTTAGGGATTGTTACTAAGGAGATGCTTGCAATTCCGAAATGGAGGTTTTTTGTTATTGGATTTTTAGAAGCTTTGGGATTGGTTGCTGGAATGTCTTCTGGAGCGGTACTTCCTGGACCAGTCATACCCATATTGAATCAGACTTATTTAGTTTGGCAGTTAGTGTTTTCCACTCTTATCCTGAGGAGAAGGTACTCAATTAACCAAATTGCTGGGTGTTTACTAGTAGCTGCTGGTGTGCTGGTTGCTATCTCAAGTGGCTCTAATGCAGGTCAGATGCTCTCTAAAGTTGATTTCTTTTGGCCAGCATTGATGATAGTTTCTTGTGCCTTTCAAGCCGGGGCTTCGATAATCAAGGAATTTGTATTTCTTGATTCTTCTACACGATTAAAGCAAAAATCATTGGATATATTTGTGGTCAATTCTTATGGATCTGGATTTCAGGCTCTTTTTGTACTTCTCTTTCTACCTTTAATCTCTAATTTGAAAGGAATACCATTTGCTCAACTTCCTTCATATCTTAAAAGTGGTGCTGGATGCTTTCTAAACATTGGAGCTGATAAAATAGGTTGTGATGGTGCTCCCTTACTTCCGCTGCTCTATGTAATCACCAATTTGGCATTCAACATATCCCTACTTAGCGTACTGAAAAGTTCTTCTGCAGTTGTCGCTTCTCTCGTGTTGATGTTGTCAGTGCCAATTTCTGTTTATACTCTTTCCCTTCCATTACCATATCTTCCCAAGGGAGGAACAAGCTTGAGTCCATTCTTTCTGCTTGGCTGTGCAATTCTTGTATGCGGGCTTTATTTGTACAACACAACCCGGCCTGCAAGGGATAGTTCAGAAGATGACTGA 1278 0.3873 MAVYSTTLFNFHSFPFNSSSSSSSSSSSSSSSFSHQFHFQNLKLKNLIPMSSLLPIKSPFHLPSKTRFNRTHPTVYKFRTSSTATNRTVFLSVTTVSLAVANRVLYKLALVPLNNYPFFLAQFTTFGYVVIYFSILYIRYRLGIVTKEMLAIPKWRFFVIGFLEALGLVAGMSSGAVLPGPVIPILNQTYLVWQLVFSTLILRRRYSINQIAGCLLVAAGVLVAISSGSNAGQMLSKVDFFWPALMIVSCAFQAGASIIKEFVFLDSSTRLKQKSLDIFVVNSYGSGFQALFVLLFLPLISNLKGIPFAQLPSYLKSGAGCFLNIGADKIGCDGAPLLPLLYVITNLAFNISLLSVLKSSSAVVASLVLMLSVPISVYTLSLPLPYLPKGGTSLSPFFLLGCAILVCGLYLYNTTRPARDSSEDD 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04607 425 PANTHER PROTEIN CLT2, CHLOROPLASTIC 77 421 IPR013936 -
Trre5g04607 425 Pfam CRT-like, chloroquine-resistance transporter-like 90 412 IPR013936 -
Trre5g04607 425 SUPERFAMILY Multidrug resistance efflux transporter EmrE 150 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04607 Trre-Chr5 48078761 48085166 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04607 - - ccaj:109802647 558.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04607 5 48078761 48085166 Trre5g04607 5 48078761 48085166 ECH