Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04606 ATGAGGAATCCTGAAAACAATCTCATCAATGAAAATAACAGGGAAAAAGAAGCATCTCAGCTTGCTGCATTGTTGAAAGAAATGAAGGAAGGACTTGATAATATTAGGCGAAAAATTCAAACTTTAACTGCCAAGGTGAAGGATCAAAGTTCTACAGCAGATGGGTTTAGTTATCTTGAAGCGAAAAATTTGCTGCTTTTGAATTATTGTCAATCTCTTGTTTATTATTTGTTGCGAAAGGCTAAGGGTTATTCGATAGAAGAACACCCTGTTGTTCGAAGTATTGTAGAGATACGATTATATTTAGAAAAGATTCGTCCGATTGACAAAAAGCAACAATACCAAATCCAAAAATTAATTAAAGCTAGTGAAAATACAACTAATACCGGTGAGAAGGAGCCAGTTGCGTCCAATAAGAGTGATGATGTTTCAAAGTATCGTCCAAATCCCAACAATCTTATTAGCAAAGTGGAACCAACCGTTGAGGACGGTGATGGTGATGGTGTGTATCATCCTCCTAAATTTGCCCCTACATCTATGGATCTAGACAAGTCTTCAAAGCAAGAAAGGAATTCCAGCCGACGAGACAAAGAAATTCTGAAACAAGCTAAGCAGAGTGATTTTATCAGGTCATTGGTGACTGATATGGAGGACAGACCTGAAGAGATAAAAGATTTTGAGGGAACTAGTAGAGAAGTGGATAAGTTTGTTAGGAAAATGGATGAGAGGGCTAAGCAAGAGGAGGAGCTGTTCAACCGTGTTCCTATGACGAGAGAGGAGAGGAAGAGAGAGAAGCACTTGAAGAAAGCAACAAATGGGATGCAAGGTCTAACAGATAGTTTATTCGATGAAATCAAAGGATTATCCTTTGAAGATAATACTGGAGAGCAAACAAGGGGCTTCAAAAAGGGTAGCAAAAGAAATGGGAAGCTGAAGAAGCGAAAGAGAAAACATTGA 957 0.3835 MRNPENNLINENNREKEASQLAALLKEMKEGLDNIRRKIQTLTAKVKDQSSTADGFSYLEAKNLLLLNYCQSLVYYLLRKAKGYSIEEHPVVRSIVEIRLYLEKIRPIDKKQQYQIQKLIKASENTTNTGEKEPVASNKSDDVSKYRPNPNNLISKVEPTVEDGDGDGVYHPPKFAPTSMDLDKSSKQERNSSRRDKEILKQAKQSDFIRSLVTDMEDRPEEIKDFEGTSREVDKFVRKMDERAKQEEELFNRVPMTREERKREKHLKKATNGMQGLTDSLFDEIKGLSFEDNTGEQTRGFKKGSKRNGKLKKRKRKH 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04606 318 MobiDBLite consensus disorder prediction 125 200 - -
Trre5g04606 318 MobiDBLite consensus disorder prediction 142 156 - -
Trre5g04606 318 MobiDBLite consensus disorder prediction 183 200 - -
Trre5g04606 318 Pfam Sas10/Utp3/C1D family 25 104 IPR007146 -
Trre5g04606 318 MobiDBLite consensus disorder prediction 292 318 - -
Trre5g04606 318 Coils Coil 18 52 - -
Trre5g04606 318 MobiDBLite consensus disorder prediction 257 278 - -
Trre5g04606 318 MobiDBLite consensus disorder prediction 304 318 - -
Trre5g04606 318 PANTHER SOMETHING ABOUT SILENCING PROTEIN 10-RELATED 15 312 IPR007146 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04606 Trre-Chr5 48074710 48077167 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04606 K14765 - gmx:100802099 418.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04606 5 48074710 48077167 Trre5g04606 5 48074710 48077167 ECH