Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04583 ATGACTTCGTCCAATTCCGATTTTGTCCGTACAATTGAATCCGCACTCGGAATTTCTCTCGGAGATTCCGTTTCCGATTCGGTTGTTCTCATCGTAACTACTTCCGCCGCCGTCATAATTGGACTTCTGGTGTTTCTATGGAAGAAATCGTCGGATCGGAGCAAAGAGTTGAAACCAGTCATAGTTCCGAAGTTATTGGTGAAAGAAGATGAAGACGTCGATGTTGATCCCGATAAGACCAAAGTTACCATTTTCTTTGGTACTCAAACTGGTACTGCTGAGGGATTCGCTAAGGCATTGGCAGAGGAGATCAAGGCTAGATATGAAAAAGCATTCGTCAAAGTTGTTGATATGGATGACTATGCAGCCGATGATGATCAATATGAAGAGAAGCTGAAGAAAGAAACTCTTGCATTTTTCATGCTGGCAACCTACGGAGATGGAGAGCCAACTGACAATGCTGCAAGATTCTATAAATGGTTTACTGAGGGTAAAGATGAGAGGGGCACCTGGCTTCAACAGCTCACATATGGAGTTTTTGGCCTAGGTAACAGGCAATATGAACATTTTAATAAGATAGGTAAAGTTGTTGATGACGATCTCAGTGAACAAGGTGCAAAGCGTCTTGTTCCCCTTGGACTAGGTGATGATGATCAATCCATCGAGGATGATTTTTCTGCATGGAAAGAAACTCTGTGGCCTGAGTTGGATCAGTTGCTCCGAAATGAGGCTGATGTAAATACCGTGTCTACTCCCTATACAGCTGCTATATCTGAATATCGAGTAGTGATTCATGACCCCACTGTCACCTCGTCCTACGAGAATCACTTCAATGCGGCAAACGGGGGTGCTGTATTTGATATTCATCATCCTTGCAGGGTGAATGTTGCTGTTCGTAGGGAGCTTCACAAACCTCAGTCTGACCGTTCTTGCATACATTTGGAGTTTGATGTATCAGGGACGGCCATAACATACGAAACTGGAGATCATGTGGGTGTTTATGCTGATAATTGTGATGAAACTGTTGAAGAAGCTGGGAAGTTGTTGGGTCAGAATTTAGACTTGCTGTTTTCTCTCCACACTGATAAGGAGGATGGCACTCCCCTAGGTGGTTCTCTTCAACCTCCTTTCCCTGGTCCTTGCACAGTGCGCACTGCATTAGCAAGTTATGCAGATCTCTTGAACCCCCCACGAAAGGCTGCTTTAGTTGCATTAGCTGCTCATGCATCTGAGCCTAGTGAAGCAGAAAGATTGAAGTTTCTCGCATCTCCTCAGGGAAAGGATGAATACTCCAAATGGGTTGTTGGAAGCCACAGAAGTCTCCTTGAGGTGATGGCTGATTTTCCATCAGCAAAGCCTCCCCTGGGTGTGTTTTTTGCTGCCATAGCCCCTCGTTTACAGCCTCGATATTATTCTATTTCATCCTCTCCTAGGCTTGCCCCACAAAGGGTACATGTAACTTGTGCCCTGGTAGAAGGTCCAACTCCGACTGGGAGAATTCACAAAGGAGTGTGTTCAACCTGGATGAAGAATGCTATTCCCTCAGAGGAAAGTCGTGACTGTAGCTGGGCTCCCATTTTTATCAGGCCATCAAATTTCAAGCTACCAGCCGATCATTCAACTCCTATTATTATGGTTGGACCTGGTACTGGTTTAGCACCTTTTAGGGGATTTTTACAGGAGAGACTTGCCCTCAAAGAGGACGGAGTTCAACTTGGTCCTGCATTACTCTTCTTTGGATGCAGAAACCGTCAAATGGATTTCATTTATGAGGATGAGCTAAATCATTTTGTGGAACAAGGTGCTCTGTCTGAGTTGATAGTTGCATTCTCTAGAGAGGGGCCTGAAAAGGAGTATGTTCAACACAAAATGACGGATAAAGCGGCATACTTGTGGAGTCTGATTTCTCAGGGAGGTTATCTTTATGTCTGTGGTGATGCCAAGGGCATGGCCAGAGATGTACATCGAACTCTTCATACCATCGTCCAGCAGCAGGAAAATGCGGATTCCACAAAGGCAGAGGCTACGGTGAAAAAACTCCAGCTGGATGGGCGTTACCTTAGGGATGTTTGGTAA 2076 0.4513 MTSSNSDFVRTIESALGISLGDSVSDSVVLIVTTSAAVIIGLLVFLWKKSSDRSKELKPVIVPKLLVKEDEDVDVDPDKTKVTIFFGTQTGTAEGFAKALAEEIKARYEKAFVKVVDMDDYAADDDQYEEKLKKETLAFFMLATYGDGEPTDNAARFYKWFTEGKDERGTWLQQLTYGVFGLGNRQYEHFNKIGKVVDDDLSEQGAKRLVPLGLGDDDQSIEDDFSAWKETLWPELDQLLRNEADVNTVSTPYTAAISEYRVVIHDPTVTSSYENHFNAANGGAVFDIHHPCRVNVAVRRELHKPQSDRSCIHLEFDVSGTAITYETGDHVGVYADNCDETVEEAGKLLGQNLDLLFSLHTDKEDGTPLGGSLQPPFPGPCTVRTALASYADLLNPPRKAALVALAAHASEPSEAERLKFLASPQGKDEYSKWVVGSHRSLLEVMADFPSAKPPLGVFFAAIAPRLQPRYYSISSSPRLAPQRVHVTCALVEGPTPTGRIHKGVCSTWMKNAIPSEESRDCSWAPIFIRPSNFKLPADHSTPIIMVGPGTGLAPFRGFLQERLALKEDGVQLGPALLFFGCRNRQMDFIYEDELNHFVEQGALSELIVAFSREGPEKEYVQHKMTDKAAYLWSLISQGGYLYVCGDAKGMARDVHRTLHTIVQQQENADSTKAEATVKKLQLDGRYLRDVW 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04583 691 Pfam Flavodoxin 84 228 IPR008254 GO:0010181
Trre5g04583 691 Gene3D - 335 467 IPR023173 GO:0016491
Trre5g04583 691 Hamap NADPH--cytochrome P450 reductase [POR]. 23 691 IPR023208 GO:0003958
Trre5g04583 691 ProSiteProfiles Flavodoxin-like domain profile. 82 233 IPR008254 GO:0010181
Trre5g04583 691 Gene3D - 535 691 IPR039261 -
Trre5g04583 691 Pfam Oxidoreductase NAD-binding domain 545 655 IPR001433 GO:0016491
Trre5g04583 691 CDD CYPOR 287 691 - -
Trre5g04583 691 PRINTS Flavodoxin signature 83 96 IPR001094 GO:0010181
Trre5g04583 691 PRINTS Flavodoxin signature 198 217 IPR001094 GO:0010181
Trre5g04583 691 PRINTS Flavodoxin signature 139 150 IPR001094 GO:0010181
Trre5g04583 691 PRINTS Flavodoxin signature 174 184 IPR001094 GO:0010181
Trre5g04583 691 SUPERFAMILY Flavoproteins 78 241 IPR029039 -
Trre5g04583 691 Pfam FAD binding domain 286 508 IPR003097 GO:0016491
Trre5g04583 691 PIRSF P450R 18 691 IPR023208 GO:0003958
Trre5g04583 691 FunFam NADPH--cytochrome P450 reductase 1 535 691 - -
Trre5g04583 691 Gene3D - 49 251 IPR029039 -
Trre5g04583 691 FunFam NADPH--cytochrome P450 reductase 335 467 - -
Trre5g04583 691 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 544 563 IPR001709 GO:0016491
Trre5g04583 691 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 469 476 IPR001709 GO:0016491
Trre5g04583 691 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 503 512 IPR001709 GO:0016491
Trre5g04583 691 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 325 335 IPR001709 GO:0016491
Trre5g04583 691 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 586 597 IPR001709 GO:0016491
Trre5g04583 691 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 573 582 IPR001709 GO:0016491
Trre5g04583 691 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 617 633 IPR001709 GO:0016491
Trre5g04583 691 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 640 648 IPR001709 GO:0016491
Trre5g04583 691 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 532 691 IPR039261 -
Trre5g04583 691 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 289 536 IPR017927 GO:0016491
Trre5g04583 691 SUPERFAMILY Riboflavin synthase domain-like 281 533 IPR017938 -
Trre5g04583 691 Gene3D Translation factors 291 534 - -
Trre5g04583 691 PANTHER NITRIC OXIDE SYNTHASE-RELATED 78 691 - -
Trre5g04583 691 FunFam NADPH--cytochrome P450 reductase 63 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04583 Trre-Chr5 47692249 47699645 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04583 K00327 - gmx:100798676 1199.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04583 5 47692249 47699645 Trre5g04583 5 47692249 47699645 ECH