Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04553 ATGGAGAGAGGGAAGAATAAGATCAGTGAAGCTGAAGCTGATTCAGTTGCATTTGGGGATGTTATATATGTCAAGCTTCGTAGTGGTTCATGGTGGCCTGCACAGGTTGTTGATGATAAGTCAATCCTTCCGAGTCTTAAACCTAGAAATCGTCGTGCTGAGGATGTCCTTGTCCGGATTTATGGAAGTCATACATTCATGAATGTAAATCCTGTTAGATCTTGTTCTGAGTTTGAGACGATTCTCAAGAATAATAATGGGGATCTGCGAAAAATACTCCAAGAAGGTCTTGAAAAGGACCTTCCTAGCTCAAAGAAGTCAGCATCAAAGGCCAAAGGATCGCCAAGCACCAAAAAGAGAAAATCTAACAAGAAAGAGGAGGAGCAGACCCCAGCAAAGCACCAAAAAGGAAACAAGGCTTCAGATGATGATGATGATCAGGCTAGCCCAAGTTGTGAAACAGCGTCTGGAAAGCTCCAAGAGTTGAGTTCTCGAAGGATAAGAGTGATGCAAAGCCTCGGTCTCATTGCTCCATCTGGATCACCATTTATCAAAGTTAGGAATAATTGCAATACTACCCCGTGA 585 0.4291 MERGKNKISEAEADSVAFGDVIYVKLRSGSWWPAQVVDDKSILPSLKPRNRRAEDVLVRIYGSHTFMNVNPVRSCSEFETILKNNNGDLRKILQEGLEKDLPSSKKSASKAKGSPSTKKRKSNKKEEEQTPAKHQKGNKASDDDDDQASPSCETASGKLQELSSRRIRVMQSLGLIAPSGSPFIKVRNNCNTTP 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04553 194 Gene3D - 9 148 - -
Trre5g04553 194 MobiDBLite consensus disorder prediction 120 146 - -
Trre5g04553 194 CDD PWWP 19 99 - -
Trre5g04553 194 MobiDBLite consensus disorder prediction 150 167 - -
Trre5g04553 194 SUPERFAMILY Tudor/PWWP/MBT 17 82 - -
Trre5g04553 194 Pfam PWWP domain 19 109 IPR000313 -
Trre5g04553 194 ProSiteProfiles PWWP domain profile. 18 66 IPR000313 -
Trre5g04553 194 MobiDBLite consensus disorder prediction 97 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04553 Trre-Chr5 47500556 47504510 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04553 - - cam:101508242 212.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04553 5 47500556 47504510 Trre5g04553 5 47500556 47504510 ECH